Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01818 ATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACATCTGACATCGTCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCCAAAAAGAAACAAGCTCTTGTGGACATGCTTCCAACCTTGATTGAACTTCAACGGGCTTTGAACATGCAATCAACACTTGAATCCCTTGCCGAGGAAGGGAATTACTGGAAGGCATTTCAAGTTCTATCTGAGTATTTGCAACTCTTAGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGCGTGGAGGTTTGGCTGGGAAGAACGTTGCAGAAGCTGGATGCTCTTTTATTGGGAGTGTGTCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCTTATGCATTAATAGGGGATACTGCTGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCTATTATGCATGAGGATGAGGAGGAAGTTTTGCAAAATAGTAGGCTCACTTACAGCGATCTATGCCTCAGAATACCGGATTCAAAGTTCAGGCTATGCTTATTAAGAACACTGGCTGTTCTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCGAGCTGGAAAGAAAGGACACAGTACGAAATTCAAATAAGTGCAATGAAGAGATTTCCTGCCGTCCAGGCGCTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTTTGTCCAGTTCAGGAGATATATTACATGGTTCATCTTCTAGGGAGGAATCTGTAACAATGAGCTCTCTGACTGAAACTAGTGGTTCACCATACAGTGATTATCATGATCCATTTAAGGAGACTGGAAAGGAGGACAGTGCAACATTAAACATTGAATCCCCTTGGTACCATCTTCGCAAAGAAGCTATAACATTTGTGTCACAGACCCTTCAAAGAGGGCGAAGGAATTTGTGGCATCTCACTGCAAGTCGTGTGTCTGTTTTGCTTTCTTCTGCTGCAGTTTGTACCGCCAGTATTCATCAATTCTTGAAAAATTATGAAGAACTCAGTGTCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATCGAAGCAGTTGAATTTAGGCAGAAGCTAAAGGCTGTGTGTGAAAATTATTTCACAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTATGGAGAGAGAGACCTGGCTAAAATTACCTCTAGAAACAGTACAAATGATCAGTTTTGCAGGACTTATTGGTGATGGTGCACCCTTGATTTCTTTATCCAGTGGCAAATCAATTAATGCCGGTGCATTTCATTCCCCTAAATCAGGGAATATGGTTCATACTGGTGCAAGGAAAAATGGGTTTTCTCACTGGATAAAAAGTGGAAACCCTTTCTTGCAAAAATTACCACCTAATGGATTAGTTCATGGTGAATTTGATGATAGAACACCTAGAAAGAACGATTCCAATCACATAAATGGCGCCAGTTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGCCAACTACCAAGTCGAAGTTCTAAACCCTTTCATTCAAGAACTCTTTCTTCACATGGTAATGATGACGAGAATACAACACAAACTGGATCGTCTCTCTGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTTAAGGGAATATGCCAATTGTTTGAAATATTTTTCTATAATATATATGAAACATTTGGTCAGCAAAACACTGGTTCAAGTGGAAAAAGCTCAACTAACTCTCTTAATTATCGCTTGAGAACAGCTTTATCTAGAGTAAACCAAGATTGTGAAGAGTGGATTAAGCCTCAATCGTCTTCACCAACATCTTTGACCTCTTCATTTGCACATCCAGAGTTGACACCTACAAACCCGCCCAATGCAAATTTTGGTCATTCCTCGGGGACCTCTTTGGGTCTCACGGAAAGATGTGTAGCTGTTGACACTCTATCTCTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTACGTTCATATGGTGGATGCTGTACCAGATCTTACAGAACATGTTCATCGGACTACAGTGAGACTATTGTTGCACATTAATGGATATGTTGATCGTGTTGCCAATTGTAAATGGGAATTAAAAGAGCTTGGCATGGAGCATAATGGATATGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACAAGACTTGCTCATGGAGGAATTCGTAAAGAGATTCAAGGCCTATTATTGGATTATGGGCTTGAAATTGTGGCAGAAACTCTTGTTGAAGGACTTTCAAGGGTGAAGAGATGCAGTGATGAAGGACGAGCTCTTATGTCATTAGATCTTCAGGTTTTGATTAATGGATTACAGCATTTTGTGTCAGTGAATGTGAAGCCCAAGCTTCAAATGGTCGAAACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCTCGAGCACACCCAGAATACAGTAAAAGCCAGATTATCGGACTGATCAATCTTGTTTCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGATATACTGGAAAAGATTGAATGA 2739 0.3939 MNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALVDMLPTLIELQRALNMQSTLESLAEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIMHEDEEEVLQNSRLTYSDLCLRIPDSKFRLCLLRTLAVLFDLMCSYHEIMDFELERKDTVRNSNKCNEEISCRPGAQEVDSDVRACNNSLSSSGDILHGSSSREESVTMSSLTETSGSPYSDYHDPFKETGKEDSATLNIESPWYHLRKEAITFVSQTLQRGRRNLWHLTASRVSVLLSSAAVCTASIHQFLKNYEELSVFILTGEAFCGIEAVEFRQKLKAVCENYFTAFHRQNVHALKMVMERETWLKLPLETVQMISFAGLIGDGAPLISLSSGKSINAGAFHSPKSGNMVHTGARKNGFSHWIKSGNPFLQKLPPNGLVHGEFDDRTPRKNDSNHINGASSVSEDENEDLLADFIDEDSQLPSRSSKPFHSRTLSSHGNDDENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYNIYETFGQQNTGSSGKSSTNSLNYRLRTALSRVNQDCEEWIKPQSSSPTSLTSSFAHPELTPTNPPNANFGHSSGTSLGLTERCVAVDTLSLVARILNRSKAHLQSMLLQSNSTILEDFYVHMVDAVPDLTEHVHRTTVRLLLHINGYVDRVANCKWELKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEIQGLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSVNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIIGLINLVSTMKGWKRKTRLDILEKIE 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01818 912 Pfam Vacuolar-sorting protein 54, of GARP complex 1 225 IPR019515 -
Viun11g01818 912 MobiDBLite consensus disorder prediction 537 564 - -
Viun11g01818 912 MobiDBLite consensus disorder prediction 268 294 - -
Viun11g01818 912 MobiDBLite consensus disorder prediction 646 666 - -
Viun11g01818 912 MobiDBLite consensus disorder prediction 268 293 - -
Viun11g01818 912 PANTHER UNCHARACTERIZED 1 912 IPR040047 GO:0032456|GO:0042147|GO:1990745
Viun11g01818 912 MobiDBLite consensus disorder prediction 490 522 - -
Viun11g01818 912 Pfam Protein of unknown function C-terminus (DUF2451) 682 912 IPR019514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01818 Viun-Chr11 34232072 34256163 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01818 K23288 - gmx:100788476 1593.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01818 11 34232072 34256163 Viun11g01818 11 34232072 34256163 ECH