Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01800 ATGGGGACTCTGTTTGCTGATGAAAAATCTGAGAACCCAAATGGTGTTCATCAATTTCACCACCAACATGATGTTGATGCAGGAGCTCTTTTTGTTCTCAAATCCAAAGGTTCTTGGTTGCATTGTGGATACCATTTGACCACATCGATTGTTGCAGCACCTGTTCTGAGTCTTCCTTATGCATTCACCTTCCTCGGATGGACGGCTGGGATCTCATGCTTGATGATTGGGGCATTGGTGACTTTCTATTCATATAATTTAATATCTAGGGTTCTTGAACACCACGCGCACAATGGTAAGCGTCAACTACGCTTTAGAGACATGGCTCATGATATTTTAGGTCCAAGCTGGGGTCGTTATTTTGTTGGCCCAATTCAGTTCGGAGTTTGTTTTGGTGTTGTAGTGGCTTGCACTCTATTAGGAGGACAATGCATGAAGGCAATTTACTTGTTGTCAAATCCAAATGGGACCATGAAGCTTTATGAGTTTGTAATCATATTTGGATGCTTCATGCTAATTTTGGCCCAAATCCCATCTTTCCACTCACTCAGACACATTAATTTGTTGTCACTCATTCTCTGCTTAGCCTATAGTCTTGGTGCTACGGCTGGTTCCATTTACATTGGAGAGTCATCCAAAGGACCAAAAAAGGACTACACTTTGAAAGGTGATATTGAAAATCGCTTATTTGGAGTCTTCAATGCAATTGCCATTATTGCCACAACCTATGGAAATGGAATCATTCCAGAAATCCAGGCAACACTAGCACCACCAGTGAAAGGGAAAATGTTCAAGGGACTATGTGTGTGCTATTTTGTAGTTATAGTCACTTTCTTTAGTGTATCTTTTTCTGGTTATTGGGCATTTGGCAATGAATCTGAAGGCCTCATTTTAAGCAATTTTGTGGACAATGGGAACCCTTTGGTGCCCACATGGTTCATTTACATGACCAACATTTTCACTATAACACAACTATCAGCAGTTGGTGTGGTTTATTTGCAACCAACAAATGAAGTGTTGGAGCAAGCATTTGGAGATCCAAAAAGCCCTGAGTTCTCGAAACGCAATGTAATTCCAAGAGTGATTTTTCGATCACTAGCTATTATTATTTCAACCATTATAGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCTCTTATTGGAGCTTTTGGCTTTATCCCTCTCGATTTCATCTTGCCAGTAATTTTCTACAATTTCACATTTAAGCCATCTAAGCGAAGCTTTATTTTCTGGTTGAATGTAACTATTGCAATGGTTTTTTCTGCATTGGGAGCTATATCAGCAATTGCAGCTGTTAGACAAATTGTTCTTGATGCAAAAAATTATCAATTATTTGCTAATGTATGA 1371 0.3931 MGTLFADEKSENPNGVHQFHHQHDVDAGALFVLKSKGSWLHCGYHLTTSIVAAPVLSLPYAFTFLGWTAGISCLMIGALVTFYSYNLISRVLEHHAHNGKRQLRFRDMAHDILGPSWGRYFVGPIQFGVCFGVVVACTLLGGQCMKAIYLLSNPNGTMKLYEFVIIFGCFMLILAQIPSFHSLRHINLLSLILCLAYSLGATAGSIYIGESSKGPKKDYTLKGDIENRLFGVFNAIAIIATTYGNGIIPEIQATLAPPVKGKMFKGLCVCYFVVIVTFFSVSFSGYWAFGNESEGLILSNFVDNGNPLVPTWFIYMTNIFTITQLSAVGVVYLQPTNEVLEQAFGDPKSPEFSKRNVIPRVIFRSLAIIISTIIAAMLPFFGDINSLIGAFGFIPLDFILPVIFYNFTFKPSKRSFIFWLNVTIAMVFSALGAISAIAAVRQIVLDAKNYQLFANV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01800 456 Pfam Transmembrane amino acid transporter protein 36 440 IPR013057 -
Viun11g01800 456 PANTHER OS05G0424000 PROTEIN-RELATED 38 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01800 Viun-Chr11 34016698 34024476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01800 128 456 Organic Solute Cotransporters AT1G08230 66.465 7.14e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01800 - - gmx:100791114 806.208