Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01787 ATGTTTTTGGTGGTAAGACCATGTGGTTCTTCCTCTGCGGGTATTCATCGTCTTCACCCAACTCCCACATCGCACCGTAGCAGAAACGTGGTTATTAGATGCTCGCTCAGCAGCGTGCAGGAGAAGAAGGAGAAAGCTGAATTGGATTCGGAGCTGCAGCCTTCGCTGGCATTTCCGCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAAAGCACGTGGAACGCGGAGGGGAGAATCCAAGGAAGCTCTAATTTCTCTGTTCTCACGAAGAAGGGGGAGTCTCAGGCTGAGACCTCACGCCAAATGCTCATCGACGACAACTTCGATGCGTGCTTTGCCAGTCCTTTGGCTCGATCCAAGAAAACTGCTGAAATCATTTGGGGATCGCGCCCGGAACCCATCATTACCGACTCTGATTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAGGGGAAAGCAAAATTTGGTTCTGCTTTTCATCAATGGCAGGTTGATGCTGAGAATTTCATCATTGATGGTCATTATCCAGTTAGAGAGTTGTGGGATCGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGGGTCCGAGTATTTCAGAAAATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGACTTCATCCCAAGATCTGAGGGTGGATCTCCGCATATTTGCCTTAACCGGTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGTCGAGAGACAAGTAAGAGGATCATACTTGTTTGTAATGGATCAACACAAGGAAATACAGAGAATGGTTTTCCTTTCGGTGGTGATCAACCATTGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTACTTGATTTGAAAGTGAGTTCCATAATTAGCAGTTCTAACAAAGCCAGTGTTGGGACAGCCTCGGTAATCTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATTGGGAACCTTGATGTTGAAACTATCTTCAAGCAATCTGAAATGGATATATCAAACTTTCCGCCATTTCAACCTGGTTGGTTAAATAGAGTTGATGATGGATTGAGAACAAGATTATGGAATCAATCTGGAAAAGTGTGGCAATCTTTGTTGGATGAAATATCTGATGAATCTAAGCCAGAAGAAGTTATAGTGGCAGTTGGTCACCCTGCAATCCACATAGCACTAATGGGGCACTGTCTTAATTTGAGCAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGCGTTAGTGTTCTTGATTTCCCTGATGGAGCTAAGGGAAAAGGTGTCATCAGATGCATAAATTATACTGCACATTTGGGGAGATGGTCCATACCCATCACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1530 0.4562 MFLVVRPCGSSSAGIHRLHPTPTSHRSRNVVIRCSLSSVQEKKEKAELDSELQPSLAFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDNFDACFASPLARSKKTAEIIWGSRPEPIITDSDLREIDLYSFQGLLKHEGKAKFGSAFHQWQVDAENFIIDGHYPVRELWDRARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGSEYFRKLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGRETSKRIILVCNGSTQGNTENGFPFGGDQPLNMLGVIQSQKSAELLLDLKVSSIISSSNKASVGTASVISQVQEAADCLGADCVPRYVEMKQIGNLDVETIFKQSEMDISNFPPFQPGWLNRVDDGLRTRLWNQSGKVWQSLLDEISDESKPEEVIVAVGHPAIHIALMGHCLNLSKEWLGSFHLDAGSVSVLDFPDGAKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01787 509 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Viun11g01787 509 Pfam Histidine phosphatase superfamily (branch 1) 285 477 IPR013078 -
Viun11g01787 509 Pfam Histidine phosphatase superfamily (branch 1) 67 248 IPR013078 -
Viun11g01787 509 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 276 496 - -
Viun11g01787 509 FunFam Phosphoglycerate mutase 65 269 - -
Viun11g01787 509 SMART PGAM_5 284 446 IPR013078 -
Viun11g01787 509 SMART PGAM_5 66 220 IPR013078 -
Viun11g01787 509 SUPERFAMILY Phosphoglycerate mutase-like 65 261 IPR029033 -
Viun11g01787 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 280 476 - -
Viun11g01787 509 Gene3D - 277 496 IPR029033 -
Viun11g01787 509 CDD HP_PGM_like 66 247 IPR013078 -
Viun11g01787 509 SUPERFAMILY Phosphoglycerate mutase-like 284 499 IPR029033 -
Viun11g01787 509 Gene3D - 65 252 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01787 Viun-Chr11 33858489 33863101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01787 K22200 - gmx:100798495 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01787 11 33858489 33863101 Viun11g01787 11 33858489 33863101 ECH