Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01758 ATGGAGTTTGGAAGTGTTCACAACTTTCTAGACGGAAAAACCATTTTAGTTACGGGTGCAACGGGATTCCTTGCGAAACTTTTGGTGGAGAAGATATTAAGGGTTCAACCAAACATCAAAAAGTTATACCTTCTTCTAAGAGCAGCAGATTCAGAAGAAGCTACAAAACGGCTGCACGATGAGGTTCTGTCGAAGGAGTTGTTCAGGGTGCTACGAGGTATGTGGGGTGCAGATTTTGTCTCCTTCATATCTCAGAAAGTGTTGGCTGTTGGTTGCGATGTTTCTGTTGAGAACTTGGGAATTAAAGACACAAAGCTCAGAGAAATGTTGTTGGCGGAGACGGACATCATAGTAAATGCTGCTGCTACTACCAATTTTTATGAGAGATTGGATGTTGCGATGGGGATTAATACGATGGGTGCTCTTAATATTGTGAACTTCGCCAAGAACTGCAGTAAACTACAAATGCTTCTTCATGTATCCACCGCTTATATATGCGGTGAGCGAAAAGGACTTGTGGCAGAGGAGCCTTTTGCTATGGGCGAGACCCTAAATGGGTCCTCAAAATTAGACATCAACATAGAAAAACTGTTAACTGAAGAAAAATTGAAGGAACTTGAGGCAGAAAATGCCAGTGAAAAAACAATCACATCGGTTATGAAAAACCTTGGAACTATAAGGTCAAATTTACATGGATGGCCAAATGTGTATGCATTTACAAAAGCAATGGGGGAAATGATTTTGTTGAAGATGAAAGGTGATATACCATTGATCATTGCACGCCCCACCATAATACTCAGCACTCACTCTGAACCATTTCCCGGTTGGATTGAAGGTGTGAGAACTGTGGACCTCTTTGTTGTGATGTACGGCAAAGGAAAATTAGGGAGAAGCGTTGGTCGTCGGAGTACAATTATAGACGCGATACCAGCAGACATGGTGATAAACTCCATGATAGTAGCACTGGAAGCTTGTTCAAAGAGTTGTTCAAAGACATTGATTTATCATATTGGTTCTTCACTCAGAAATCCATTCAGAATTTCTGATCTTGAGGACTTGGCCCATCAATACTTTACAAAACATCCTTTGACAGACATGTTTGGAAAACCAGTGGCTTGTTCCAAGAAAGTTTCGTGGATGTCTAGTGTGAGTTCATTTCACAGATACATCAACATTCGATACATGCTACCTCTCAAGGTGATGAACAAAGTGTGCTGCTACGGTCACGAGGCCTATTACAATGAAAGTAAACGGAAAGTGAAAAAGATGATGGGAATAATGAGATTTTATGAACCTTTTCTCCTCTTTGAGGGAATCTTCGATGACAAGAACGCAGAAAATTTAAGGATGACAAAAATGAAGGCAAAAGATGACGATGATGTTGGAAGATTTAACTTCGATCCCACAACCATTGATTGGACTCACTACGTGTTAAACATTCACATTCCTGGACTTGTGAAGTATGCTGTCAAGTAA 1476 0.4058 MEFGSVHNFLDGKTILVTGATGFLAKLLVEKILRVQPNIKKLYLLLRAADSEEATKRLHDEVLSKELFRVLRGMWGADFVSFISQKVLAVGCDVSVENLGIKDTKLREMLLAETDIIVNAAATTNFYERLDVAMGINTMGALNIVNFAKNCSKLQMLLHVSTAYICGERKGLVAEEPFAMGETLNGSSKLDINIEKLLTEEKLKELEAENASEKTITSVMKNLGTIRSNLHGWPNVYAFTKAMGEMILLKMKGDIPLIIARPTIILSTHSEPFPGWIEGVRTVDLFVVMYGKGKLGRSVGRRSTIIDAIPADMVINSMIVALEACSKSCSKTLIYHIGSSLRNPFRISDLEDLAHQYFTKHPLTDMFGKPVACSKKVSWMSSVSSFHRYINIRYMLPLKVMNKVCCYGHEAYYNESKRKVKKMMGIMRFYEPFLLFEGIFDDKNAENLRMTKMKAKDDDDVGRFNFDPTTIDWTHYVLNIHIPGLVKYAVK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01758 491 Gene3D - 6 386 - -
Viun11g01758 491 Pfam Male sterility protein 17 318 IPR013120 -
Viun11g01758 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 490 IPR026055 GO:0080019
Viun11g01758 491 Coils Coil 189 214 - -
Viun11g01758 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 327 IPR036291 -
Viun11g01758 491 CDD FAR-N_SDR_e 13 362 - -
Viun11g01758 491 Pfam Male sterility protein 394 491 IPR033640 -
Viun11g01758 491 CDD FAR_C 392 488 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01758 Viun-Chr11 33599491 33614461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01758 1 400 Acyl Lipid Metabolism Gene Families AT5G22500 52.120 7.74e-146 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01758 K13356 - gmx:100793736 691.419