Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01729 ATGGCTGAAAAGCACCACCTCATTCTCCTTCTTCTCTGCGCCACTCTGCAGTTCTCTTCATCTTCACCCTCCGATCACTTTTACAATGTTGGAGAACTCGTCCCATTGTTTGTCAACAAAGTGGGGCCCTTCAACAACCCCAGTGAGACCTATGAATACTATGATTTGCCATTCTGCGCCCCAGTCCCAATTGTCAAAAAGAAAGAGTCCCTGGGGGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCAGAGAGGACAAGATTGATGAGACCTTGTGCCCAAAGAAGCTTACAGTTGATGAAATTGGCTTCTTTAAGCGAGCTATAGACCGTGAATTTTACTTCCAATTTTACCTGGATGATCTTCCATTTTGGGGGTTCATTGGGAAACTTGAAGAAGATAGTTGGACTCCTGGTGGAGGAGGACAAAACTATTACCTTTTCACACATGTTCAATTTGAAGTTCTTTACAATGGGAACCAAATCATACAAGTAAATGCATTTGGCGATCCAAATCGTGCTGTAGATATTACTAAAGATGTTGGTGTTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTAAAACACGTTTTGAGAACAGGATGGATAGATACTCAAGGGCTTCGTTGATGTCTGTGCATCAGCAAGTTCATTGGTTCTCGTTCATCAACTCAATTGTCATCATTTTGCTTTTGACTGGTTTGCTTGCCCTGCTTTATATGCGACATCTGAGGAATGATTTGAAAAAGTACTCTGATGCAAATGAAGAAGATAGAGATGTTGGTTGGAAGTGCCTCCATGGCGATGTATTCAGACCTCCTCCTAACTCATCCTTACTTTTTGCTGTTGTTGGAACTGGTACCCAATTGCTAATCTTGATTTGTGTATTGCTGTTTCTAGCACTTATTGGCACCCTCTATCCCTACAATCGTGGAGCACTGTTAAATTGGCTTGTCTTGCTGTATGCTCTTTTTTCTGTATTTGCTGGCTACACTGCAGCATCCTTCCATGGCCAGTATGCTGAGAATGGATGGGAAAGGACTGTTGGTCTTGCAGGGGTTCTTTACACTGGACCAGTATTTGTTGCAGCCTCTATCATCAACATAGTTGCAATCTCTTACAGGGCTACAGTTGGACTCCCTTTTGGCTCCATTGTTGTGATTCTTGTTTTATTAACATTTCTCGCCGTGCCATTGCTTGCATTCGGTGGAGTGATCGGATACCGATTTAGATCCAAATTTCAAAGCCCCTCTGCTACAAAGAGACACCCAAGAGACATTCAACAGCATGCTTGGTACAGGAGAACACCATTTCTAATGTTTGTTGGGGGTCTTGTTCCTTTTAGTGCAATTGTTCTGCAACTACACCAGGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGTCACCTTCATTCCTGTCATTGTGATCATTGCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGGTCAGTGCTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGGTATTGTATCTACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGCTATAATGCATGCCTATGCTATGCTTTCTTCCTAATATTTGGTGCAATCAGTTTCGGAGTTTCATTTCTCTTTGTTCGCTTTATATACCACAATGTTAAAAGAGAGTAA 1761 0.4185 MAEKHHLILLLLCATLQFSSSSPSDHFYNVGELVPLFVNKVGPFNNPSETYEYYDLPFCAPVPIVKKKESLGEVLNGDRLSNALYEFKFREDKIDETLCPKKLTVDEIGFFKRAIDREFYFQFYLDDLPFWGFIGKLEEDSWTPGGGGQNYYLFTHVQFEVLYNGNQIIQVNAFGDPNRAVDITKDVGVDVKFTYSVTWNATKTRFENRMDRYSRASLMSVHQQVHWFSFINSIVIILLLTGLLALLYMRHLRNDLKKYSDANEEDRDVGWKCLHGDVFRPPPNSSLLFAVVGTGTQLLILICVLLFLALIGTLYPYNRGALLNWLVLLYALFSVFAGYTAASFHGQYAENGWERTVGLAGVLYTGPVFVAASIINIVAISYRATVGLPFGSIVVILVLLTFLAVPLLAFGGVIGYRFRSKFQSPSATKRHPRDIQQHAWYRRTPFLMFVGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFVTFIPVIVIIALVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYCIYFYVRSNMSGFLQLSFFIGYNACLCYAFFLIFGAISFGVSFLFVRFIYHNVKRE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01729 586 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 17 584 IPR004240 GO:0016020
Viun11g01729 586 Pfam Endomembrane protein 70 50 543 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01729 Viun-Chr11 33409270 33413332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01729 9 586 Miscellaneous Gene Families AT2G01970 49.574 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01729 K17085 - gmx:100818419 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01729 11 33409270 33413332 Viun11g01729 11 33409270 33413332 ECH