Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01725 ATGATGATGATCAGATCAGTAATAACAAATTTGTTGGTGAAAATCCATGGCCTTGGTTTTGGAATCAACTACGGACAGATAGCCAACAATTTACCTCTTCCATCTCAAGTAGCTGTTCTTATAAAATCTTTGAATGTGAGTAGGATCAAACTGTATGATGCTGATCCAAATGTTCTAGTGGCCTTCTCAGAAACCAATGTGGAATTCGTTATAGGACTTGGAAATGAGTACCTTGAGAACATGACAAACCCTTCCAAAGCTCAAACTTGGATTCAGCAGCATGTCCAACCTTACTTCTCGCAGACCAAAATCACTTGCATCACTGTGGGAAATGAGGTGTTCAACAGCAATGATACTCAGCTAATGTTGAACCTCCTTCCAGCAATGCAAACTGTGCATGATGCCCTTGTTAATCTTGGACTGGACCAGCAAGTTACTGTCACAACTGCTCATTCCTTCAACATATTATCCAATTCCTACCCTCCTTCATCTGGGGTTTTTAGGGAAGATCTTGCACAATATATCCAACCCCTTCTTGATTTTCATGCTCAAATCAACTCACCTTTCCTCATCAATGCATACCCTTTCTTTACATACAAAGACAACCCAAATATGGTTCCCTTAAATTATGTGCTTTTTCAGCCAAATCAAGGCACGGTTGATCCAAATACCAATTTGCAATATGACAACATGTTATATGCTCAAATTGATGCTGTCTATGCTGCCATCAAACAAATGGGGCATGATGACATTCAAGTGAGGATTTCTGAGACTGGTTGGCCTTCTAATGGTGACCCTGATGAGGTTGGAGCTACACCACAGAATGCAGAACTGTACAATGGTAACTTGCTCAAAAGGATAGAGCAGAAACAAGGCACTCCTGCAAAACCATCTGTTCCTATTGATATATATGTCTTTGCACTTTTTAATGAGGATTTGAAGCCTGGTCCAGCATCAGAGAGAAACTATGGCCTTTACTATCCTAATGGTACTCCAGTTTACAACATTGGATTGAAGGGTTATCTTCCACAGATGCCTATGGCAGCTAAATCCAATATTTTGTCAGTCAATTTTTTTGTATGCATAGTTGTAAGCTTCATCTTTGCTTTGGAGCTTTCAAGATGGTGA 1128 0.3998 MMMIRSVITNLLVKIHGLGFGINYGQIANNLPLPSQVAVLIKSLNVSRIKLYDADPNVLVAFSETNVEFVIGLGNEYLENMTNPSKAQTWIQQHVQPYFSQTKITCITVGNEVFNSNDTQLMLNLLPAMQTVHDALVNLGLDQQVTVTTAHSFNILSNSYPPSSGVFREDLAQYIQPLLDFHAQINSPFLINAYPFFTYKDNPNMVPLNYVLFQPNQGTVDPNTNLQYDNMLYAQIDAVYAAIKQMGHDDIQVRISETGWPSNGDPDEVGATPQNAELYNGNLLKRIEQKQGTPAKPSVPIDIYVFALFNEDLKPGPASERNYGLYYPNGTPVYNIGLKGYLPQMPMAAKSNILSVNFFVCIVVSFIFALELSRW 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01725 375 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 339 IPR044965 GO:0004553|GO:0005975
Viun11g01725 375 Pfam Glycosyl hydrolases family 17 21 336 IPR000490 GO:0004553|GO:0005975
Viun11g01725 375 Gene3D Glycosidases 19 342 - -
Viun11g01725 375 FunFam Glucan endo-1,3-beta-glucosidase 14 18 342 - -
Viun11g01725 375 SUPERFAMILY (Trans)glycosidases 20 336 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01725 Viun-Chr11 33366358 33370130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01725 70 369 Glycoside Hydrolase AT2G27500 65.781 1.72e-153 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01725 - - gmx:100818948 679.863