Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01719 ATGGCGGTGCGGGCCACAGTGTCGCGTTTCCCGATGGATACGGACGCGCGCGAGGCCTCCGGCCTTCTCTGGGGAGTCACCGTCACGCCTTTCGCCGCCGCCGACGAGAACAATCGCGCTCCGTCGTACGGTTCCGGAGGAGACCTTTTGCCGCGCTGCGAGAATTGCTGGGCCTACTTCAACACCTACTGCGAGCTCGAGCAGTGGGCCTGGTCCTGCTCCCTCTGCGGCAACCTCAACGGCCTCTCCTCTGACGCCATCGACCGCTACTCTCGCCCTCAGTCATCCGCCGAGATGATGTCCTCCTTCGTAGATCTCGAATTGCCTACGCAGGAATCGGCAGAGGAAGCGGCAATGCAGGCGTGTCCGGTATATGTTGCTGCTGTTGACTTGTCCTCTTCTGAGGAGTTTCTAGAACTTACCAAAAGTGCACTGCTGGCTGCTCTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGATTGTATGATGTTCAAGGTCCAATACCTGTTGTGAAAAATGTTTTCATCCCTCCTGATGCAGAGGAAACCTTGCCTATTGAGCTGGAAGATGTCATGCCTTTGTTACAGTTTCTGGCTCCTGTGGACACTTGTAAGGACCGCATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACGGCAGCAGGTCAAGGACTGGATGGTGTGCTGATAGGTGGACGTGGTTTTGGGATGGCAATGGAGGCTCTCTGCAATTACCTTGGATCTGAATATGGGAATACTTTTGCTTTAGCTAGAGTCTTTGCCTTCTTGTCTGGTCCCCCTGATTATGGAGCTGGACAATTGGACACAAGACGATATGGTGAGCAATATGCAAGCAAAGGAGAGGATGCTGATCGTGCTTTACTCCCAGAGCAGACACCCTTCTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTACACTGATTTGGCATCCCTAAAGTTTCTGAGTATTGAAAGTGGGGGTTCCTTATTTTTGTACACAAGTACTGAGGATTCAACATTGCCACAGGACATGTATCGAATGCTGAGTCGACCATATGCTTTTGGTTGTGTCCTGCGACTAAGAACCTCAACTGAATTCAAACCTGGCAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACATCATATGCTGTGATTCTTATGCTACATATGCTTACGACTTTGTATTTGAGAACAACATTGGATTTTCAAGAACTAAAGCAGATGTTCCTACAATTCAGATTGCATTTCAGTACTCAGTTGTAGTTCCTCCTCAGGAACTTTCTAATTCAGGAGGGGTTTCTACAAATAGAACCAAGCATTCCCTTCAGCGTCGGCTAAGGATCCGAACATTGCAATTTGGTGTTGCTCAGAACATTCATGAACTTTATGATAGCTGTGATCCTGAAGTTGTTCTATCTCTGCTGGTTCACAAGGTTATATTAGCCTCTTTGGAGGAAGGAGTTAGGGAGGGTAGAATTTTGCTTCAAGAATGGCTAGTGATCCTCACAGCTCAGTACAACGATGCATATAAGCTTATTCAGTATAGCAATGGAAGTTCCTTAAGATCTCAGATTGATGTTGCATTGTCTCAATGTCCTCAATTGCAGCCCCTACCACGCCTAATTTTTGCTCTCCTTCGGAATCCTCTTCTCCGCTTCCATGAAGAAGGGGTTCATCCTGACTATCGCATATATCTTCAATGCCTTTTCAGCATGTTGGAACCCAGTTCTCTTCATCGTGCTGTGTATCCTGTGTTGACATCATATGCTACACCGGATAAACAAGCATATCCTCGTCATTCATTAAGTCGCGCCGCCCTGATTACCAGCGGCAGTCCGATATTTTTCCTTGATGCATTCACAATTCTTATTGTGTTTTACTCTTCGACTGCAGACAGGACAATTCCTTTTCCTCCACCCCATGATTGTTTGTTAAGGACTACAATCAACAAATTGAAGCAAGATAGATGCATCACTCCCAAACTCCTTTTTATTCGAGGAGGGCAGGACGATGCGTCAATTTTTGAGAACTTTCTGATCGAAGAGCAGGATGTTGATGGAAGTGGTCTAACCAGTGTAATGGGTTTTGTTTCTTTCCTAGAAGATGTTACACAAAAAGTTTTGGAGTTCGTGAAATAG 2238 0.4638 MAVRATVSRFPMDTDAREASGLLWGVTVTPFAAADENNRAPSYGSGGDLLPRCENCWAYFNTYCELEQWAWSCSLCGNLNGLSSDAIDRYSRPQSSAEMMSSFVDLELPTQESAEEAAMQACPVYVAAVDLSSSEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEETLPIELEDVMPLLQFLAPVDTCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGMAMEALCNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNIGFSRTKADVPTIQIAFQYSVVVPPQELSNSGGVSTNRTKHSLQRRLRIRTLQFGVAQNIHELYDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQYSNGSSLRSQIDVALSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSMLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADRTIPFPPPHDCLLRTTINKLKQDRCITPKLLFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDVTQKVLEFVK 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01719 745 Pfam Sec23/Sec24 helical domain 500 612 IPR006900 GO:0006886|GO:0006888|GO:0030127
Viun11g01719 745 SUPERFAMILY vWA-like 123 377 IPR036465 -
Viun11g01719 745 PANTHER SEC24-RELATED PROTEIN 3 738 - -
Viun11g01719 745 SUPERFAMILY Zn-finger domain of Sec23/24 45 110 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Viun11g01719 745 SUPERFAMILY Helical domain of Sec23/24 500 616 IPR036175 GO:0006886|GO:0006888|GO:0030127
Viun11g01719 745 SUPERFAMILY beta-sandwich domain of Sec23/24 3 499 - -
Viun11g01719 745 Gene3D - 30 101 - -
Viun11g01719 745 Pfam Sec23/Sec24 trunk domain 122 374 IPR006896 GO:0006886|GO:0006888|GO:0030127
Viun11g01719 745 Gene3D Sec23/Sec24 helical domain 470 629 - -
Viun11g01719 745 Gene3D von Willebrand factor, type A domain 122 379 IPR036465 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01719 - - gmx:100807557 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01719 11 33343768 33353417 Viun11g01719 11 33343768 33353417 ECH