Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01703 ATGACTCGTGTGTTGGTTCAGAGGGGTTCTTCCGGCGGTGGTTCTTCTTCTAACGCCAACCGGACTGGTGGCTCTTCTACCAATCCCTCGGCGCGCGCAGAGGCGCAGGTTTTCGTCTCGCCGGAGAATACCGATGAGGTTGTTGTTGTTGTGCCGGATGACGTTTTGGAGAGTGGCGATAAGGGGAAGAGTGAGGAGAGTGTTCATTTTGAACAGGGTGAGGGGTCGTGTGATGATGACGTGACTACAGCTGCTGCTGCTGTTGTTGAGAGTGATGTAAGGGAGGAGTTTGTGAAGGGGTTAAGTGGACTGAGAGTGGGTGAAAGGGTTGTTGCAGAGAGTGAGGGTGCGAATGGGGATTCTTCTTCCCTACCTGTTGGTGGTGGTTCGTGTCCCCCGCCACCTCCGGTGCCGCCTCCCAAGCCTTCTTTGGCGGGGAACTTGAATGCAAGGAGGAGTGTGGCCGGGAGTTTGATTTCGGCTAGTGTGGGATCGTCGAGGAGAACATCTGCATGGCCAGTTGTTCCGGCCAGGACTTCGCCTGCTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAATAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCGTCTTATGATGATTTTGAAAGGGAGCGGCAATTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGACTCCGAACTGTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGCAAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGGTTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTTTATGGAAACAATGTTGAGATCCAAGCCATGTGCGAAATGTATAATCGACCAATCCACATATACTCCTACAGCATAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACACACCGCCAATTCGATTGAGTTATCATCATGGAAATCATTACAACTCCCTTGTTGACCCACGGCGCTTGACAATTGGTGCTGGTCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAATCTCAACAGGACGAACAGATCAATAACGCACTTTTAGCCGAGGGTCGGTTTTACTCTGATCTTGAGCTGACAGAAAAGGAAATTGAACGCATGGTGATAGAAGTTTCTCGAGCAGAGTACCTTTCAGATAGTAGTACATTTAAGCAACAACTTGGTGACAGAGAGTCCTCTACCTCAAACGCTGAACCATCGTCTTCTGGAGCAAGATCATCAGGCACTGGTCGGAAAACGACAGAAGATGGAAAAGAGCATGGTTGTGATCTGAGCAGTGGGATGCAAATTTTACTGTCGATGGGATTCACATACATCCAAGCGATTGAAGCTTACAGCATATTTGGGGACGATGTTGATTCCATGGTTTGTTACCTCTTAGAAACTGGCAGTAGCAGCAGACGCAAGGGCAAGGCCACTGAATGA 1566 0.4745 MTRVLVQRGSSGGGSSSNANRTGGSSTNPSARAEAQVFVSPENTDEVVVVVPDDVLESGDKGKSEESVHFEQGEGSCDDDVTTAAAAVVESDVREEFVKGLSGLRVGERVVAESEGANGDSSSLPVGGGSCPPPPPVPPPKPSLAGNLNARRSVAGSLISASVGSSRRTSAWPVVPARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDSSTFKQQLGDRESSTSNAEPSSSGARSSGTGRKTTEDGKEHGCDLSSGMQILLSMGFTYIQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01703 521 SUPERFAMILY Cysteine proteinases 218 354 IPR038765 -
Viun11g01703 521 PANTHER OTU DOMAIN CONTAINING PROTEIN 173 362 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 128 143 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 429 468 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 1 34 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 181 195 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 1 78 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 56 76 - -
Viun11g01703 521 CDD OTU_plant_OTU6-like 227 353 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 113 147 - -
Viun11g01703 521 MobiDBLite consensus disorder prediction 169 203 - -
Viun11g01703 521 Gene3D - 213 364 - -
Viun11g01703 521 Pfam OTU-like cysteine protease 239 348 IPR003323 -
Viun11g01703 521 FunFam OTU domain-containing protein 5 212 364 - -
Viun11g01703 521 ProSiteProfiles OTU domain profile. 231 354 IPR003323 -
Viun11g01703 521 MobiDBLite consensus disorder prediction 429 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01703 Viun-Chr11 33249261 33255031 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01703 K12655 - gmx:100809162 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01703 11 33249261 33255031 Viun11g01703 11 33249261 33255031 ECH