Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01673 ATGGGGGTACCTTCGTTCTATAGATGGTTGACTGAGAAATATCCTAGGGTGGTGCAAGATGTGGACCACGCCATGCAAGACCCAAATGGAGTGAAATATGATAACTTGTATCTTGACATGAATGCCATCATCCACCCATGTTTTCACCCTGATACTGATCATGACAATATTCCATTTCCAACAACATTCGAAGATGTTTTCAGAAATGTCTTTGAATACATTGATAGACTAGTTGACACTGTTAGGCCTCGCAAGCTCGTTTACATGGCTATTGACGGGGTTGCCCCACGTGCCAAAATGAACCAGCAACGTTCAAGACGTTTCCGAGCTTCTAAGGACAAAGAAATTCATGAAGCTGAGGAAGAGAGGTTGAGGGAACAATTTGAAATGGAAGGGAAACAAGTTCTTCCTAAAGAAGAATCTGAAGTGGCAGATTCCAATATTATAACACCAGGCACTGAGTTCATGCATGAACTCTCAAAGGCACTTAAGAACTATATCTCTTCAAGGATACTTTGCAACTCATCATGGAAGGATGTTATGGTGATTCTCTCCGATGCTAATGTTCCTGGGGAAGGGGAACATAAGATTATGTCATACATACGCAAACAGCGTACTCTGGAGGAGTATGATCCAAATACCTGTCATTGTTTATATGGCTTGGATGCTGATCTTATAATGCTTGCAATGGCTACTCACGAGCCCCATTTTTCAATATTAAGAGAGGATGTCTCTGTTCAGCAGCAGCCAAAAGTTGCTGCCAAGCCTTTCAAGCTTTTGCACATTTGGTTGTTGAGGGAGTATCTTGAGTTTGACCTGAAGATAGAAAATCCTCCCAAAACTTGTAGCATTGAGCTTGAGCGGATAATTGATGATTTCATCTTCATGTGCTTTTTTGCTGGAAATGATTTTCTGCCCCACATGCCATCTTTGGATATTCATGAGGGGGCTATTGATTTGCTAATGACTGTTTACAAGGAAGAATTCAGTAATCTTGGAGGATATCTTGTGGACATGAGCAGGGTTGGGGAGAAAAATGCTGCTTTTATGAAGTTATCTAGAGTTGAAAAATTTATACTTAAGGTTGGTACATATGAAGAGAAAATCTTTAAGAAAAGATCTGAAATACGAGAACGTAAATTGAAAAGGCTTATTCGAGATAAGGAGGATGCTTGGAGGGAAGAAAAGAATGAAAAATGTTTCTTTAATGTTGACGATGAACATACTTCTGATTGTACTCTTCTGATTAAGAAGGCACCAGATGCAAGGTTGTCTGTTTTGGTGAATAATGTTTCTGCTACAGATGCTGAAATTGAGCAAAACACAAAGGATTTAAAAGATGAATTGAAGAGAAGTATCAGAAAAAATAGTGACTTACTTTTGAGTGAAGATTTCCAAATTGACAAGATAAAATTGGGATCACCTGGTTACAAAGAAAGATATTATAAAGCGAAGTTTTCTGTGGAAACTGCTGCTGACATTGAGGGAAAAATGAAAGAAATAGTCCAGAAGTACACTGAAGGATTGGTATGGATTCTTCAATACTATTTTTCAGCAGTTGCTTCTTGGACATGGTTTTATCCGTTCCACTATGGTCCATTTGCTTCAGACTTAAAGGGCATGGGTCAAGTGAGAGTAAAATTTGAAAAGGGTGTCCCATTCTTACCACTTGATCAACTTTTAAGTGTTCTCCCTCCAGGAAGTGCTAATGCTCTTCCAAAAGCCTATGCACAACTGATGCTAGATGAGAAATCTAGAATCCTTGACTTTTATCCTCAGGATTTTGAAGTTGACACTGTAGGAAAGCGCTTCCTATGGCAGGGAATTTGCAAACTTCCATGGATAGATGATACCCGGCTTGTGGCTGAAACCAAAGAACTCAAAAATGAATTATCTGACAAGGACGCCATAAGAAATTCACCCAATGCAGATAACTTGTTTGTTAGAAGCTCCAGCAAATTAGCAGAAAAATTTGGCTCTCTATCTCTTGACCCAAATGTGCCTTGCAAGTTAGACACAAGAATAAGCAGTGATGGCATTGGGGGTAGCATAGGTCTTTGCCATGAGTTTGTTAAGGAGCCTTGCTTGTCCGTTTGTGACAACAAAGAAGATTGTGTCTTATGTGTCTATTACGAGGTTCCTGCTGGTACTAATCATATTCCTCGTTTACTATCGGGTGTGAGCCTTCCAGAGAAGACAATCTCTGAAGGTGATATTTTTGAAACCGAACTCTGGCATGAACGTCAATATAGTCGTTTTCTGAGTCTGCAAAACCAAGACAAACGGCGGAGTGAAAACACGAGCAATACTCCTCCAAGGTTTTTCTCAGATCCAAGTAGACAACATGAAAGAGGCTTTTCATCAAATGGAAGTAGCCAACATGCAAGAAGCTTTTCATCAAATGCACCTTCCTTTATTCACAAAGGTGCTGGTGTTGGATGGGGTGGTAGAGGGAGAAAAGTTAATACAGTGGAAAATGAAAGAATTCCTAGTCATGAACAACATAATGATGCAGGCTCTTATCATGTAACAACAGCTACTACTACTGAGAGGCATTTTGGTCGGGGACAAGGTAGGGGTGCATCTAGTAGCAGTTCATTGCGGCCTCAGTGGGGTGGTGCAAAATCTCAGCATGTGAAAGATCATAATCGTTGGTAA 2658 0.4014 MGVPSFYRWLTEKYPRVVQDVDHAMQDPNGVKYDNLYLDMNAIIHPCFHPDTDHDNIPFPTTFEDVFRNVFEYIDRLVDTVRPRKLVYMAIDGVAPRAKMNQQRSRRFRASKDKEIHEAEEERLREQFEMEGKQVLPKEESEVADSNIITPGTEFMHELSKALKNYISSRILCNSSWKDVMVILSDANVPGEGEHKIMSYIRKQRTLEEYDPNTCHCLYGLDADLIMLAMATHEPHFSILREDVSVQQQPKVAAKPFKLLHIWLLREYLEFDLKIENPPKTCSIELERIIDDFIFMCFFAGNDFLPHMPSLDIHEGAIDLLMTVYKEEFSNLGGYLVDMSRVGEKNAAFMKLSRVEKFILKVGTYEEKIFKKRSEIRERKLKRLIRDKEDAWREEKNEKCFFNVDDEHTSDCTLLIKKAPDARLSVLVNNVSATDAEIEQNTKDLKDELKRSIRKNSDLLLSEDFQIDKIKLGSPGYKERYYKAKFSVETAADIEGKMKEIVQKYTEGLVWILQYYFSAVASWTWFYPFHYGPFASDLKGMGQVRVKFEKGVPFLPLDQLLSVLPPGSANALPKAYAQLMLDEKSRILDFYPQDFEVDTVGKRFLWQGICKLPWIDDTRLVAETKELKNELSDKDAIRNSPNADNLFVRSSSKLAEKFGSLSLDPNVPCKLDTRISSDGIGGSIGLCHEFVKEPCLSVCDNKEDCVLCVYYEVPAGTNHIPRLLSGVSLPEKTISEGDIFETELWHERQYSRFLSLQNQDKRRSENTSNTPPRFFSDPSRQHERGFSSNGSSQHARSFSSNAPSFIHKGAGVGWGGRGRKVNTVENERIPSHEQHNDAGSYHVTTATTTERHFGRGQGRGASSSSSLRPQWGGAKSQHVKDHNRW 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01673 885 MobiDBLite consensus disorder prediction 849 872 - -
Viun11g01673 885 CDD PIN_XRN1-2-like 36 269 - -
Viun11g01673 885 Pfam Xrn1 helical domain 284 739 IPR041412 -
Viun11g01673 885 PANTHER 5'->3' EXORIBONUCLEASE 1 862 IPR027073 -
Viun11g01673 885 MobiDBLite consensus disorder prediction 756 804 - -
Viun11g01673 885 MobiDBLite consensus disorder prediction 849 885 - -
Viun11g01673 885 PIRSF Exonuclease_Xrn2 1 254 IPR017151 GO:0004534|GO:0005634|GO:0006139
Viun11g01673 885 PIRSF Exonuclease_Xrn2 247 884 IPR017151 GO:0004534|GO:0005634|GO:0006139
Viun11g01673 885 Gene3D - 132 348 - -
Viun11g01673 885 Gene3D - 1 131 - -
Viun11g01673 885 Pfam XRN 5'-3' exonuclease N-terminus 1 243 IPR004859 GO:0003676|GO:0004527
Viun11g01673 885 Gene3D - 544 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01673 Viun-Chr11 33022092 33028385 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01673 - - gsj:114379404 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01673 11 33022092 33028385 Viun11g01673 11 33022092 33028385 ECH