Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01586 ATGTATATAACAACGTCCTCTTCCTCTTCCTCTTCGCTCCTCGGAGCAACCACACCCAAACTCCTCTCTTCCTCACCTTCTAGAACCTTCGCTTTTCCTCCTTCTTTCATTCCATACTCTTCCTGCAATTCCCTCCGCTCCTACCTCCCGCGGTGGAGCCACCGCCTCCACCACGTCTCTCCCCTCTCTCTCCGTCCTCCAATCAGAGCCGTCGCTCCCGCCGTCGAACGCTTCCACCGCGAAATCGCTAACACGGGCAACGAAAATCCTTTTAAGGGAAACTTGACGAGTCTCCCCAAGCCGGGTGGTGGGGAGTTTGGAAAGTTCTACAGTCTTCCTTCTCTCAATGATCCCAGAATTGACAGGTTACCATACTCCATAAGAATTTTACTTGAATCTGCCATTCGTAATTGTGACAATTTTCAAGTAAAAAAAGAAGATGTAGAGAAGATTCTTGCCTGGGAAATAAACTCTACGAAGCAAGTTGAGATTCCTTTCAAGCCCGCTCGTGTTCTCTTGCAGGATTTTACTGGAGTGCCGGTTGTCGTTGACCTGGCTTGCATGCGCGATGCTATGAATAAGCTTGGCAATGATTCAAATAAGATCAATCCTTTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAAGTTGATGTTACAAGATCAGAAAATGCAGTGCAGGCCAATATGGAGCTTGAATTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGGTCAACTGCATTCCGTAATATGCTTGTTGTTCCCCCAGGTTCTGGTATAGTGCATCAGGTCAATCTTGAATATCTAGGAAGGGTTGTATTCAACAATGAGGGCCTCCTCTATCCTGACAGTGTGGTTGGGACTGATTCACATACAACTATGATAGACGGGCTTGGTGTTGCTGGATGGGGAGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGTCAGCCTATGAGCATGGTTTTGCCTGGTGTTGTGGGGTTCAAGTTATATGGAAAAATGCGCAATGGTGTAACAGCAACAGACTTAGTTCTAACTGTGACTCAAATTCTCCGAAAGCATGGTGTTGTGGGCAAGTTTGTTGAATTTTATGGTGATGGTATGGGTGAATTATCTTTGGCTGATAGGGCCACTATTGCTAATATGTCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACATTGCAATATCTCAAGTTAACTGGACGGAGTGACGAGACTGTGGCCATGATAGAGTCTTATCTCAGGGCAAACAAACTGTTTGTTGACTATAATGAGCCTCAACAAGACAGAGTGTATTCATCACATCTTGAATTAAACCTTTCCGACGTTGAACCTTGTATTTCAGGACCAAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATGCTTGTCTTGATAACAAAGTTGGGTTTAAGGGGTTTGCTATACCAAAAGAGGCACAAGGAAAAGTTGCAAAGTTTGATTTTCATGGGCAGCCAGCTGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGCTGTACAAATACATCAAACCCTAGTGTTATGCTTGGGGCTGGTCTTGTTGCAAAAAAGGCTAGTGAACTTGGTTTGCAGGTCAAGCCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGAGTCGTCACAAAATATCTACACCAGAGTGGACTGCAAAAATATCTAAACGAACAAGGTTTTCATATAGTTGGATTTGGGTGTACTACATGTATTGGCAATTCAGGAGAGCTGGATGAATCCGTTTCTTCTGCCATCTCAGGGAATGACATTGTAGCAGCTGCTGTGTTGTCTGGGAACCGTAATTTTGAGGGCCGAGTGCATCCATTGACAAGAGCTAACTACCTTGCCTCTCCTCCTCTAGTTGTTGCTTATGCACTTGCTGGCACGGTTGACATTGATTTTGATAAGGAGCCAATTGGGACAGGGGAGAATGGAAAGAATGTGTACTTGAGGGATATCTGGCCATCTACTGAAGAAATTGCTGAGGCTATCCAATCCAGCGTGTTGCCTGACATGTTCCGAAGCACATACGAGGCTGTTACCAAAGGGAACCCTATGTGGAATCAACTACAAGTTCCTGCTGACAGTCTCTACTCGTGGGACCCCAACTCAACATATATCCATGAACCTCCATACTTCAAGAACATGACCATGGATCCTCCAGGACCACATGGTGTAAAAGATGCTTATTGTCTACTGAATTTTGGTGACAGTATAACCACTGATCATATTTCTCCAGCTGGAAGCATTCACAAGGATAGTCCTGCTGCTAAATACCTTCTTGAGCGCGGGGTGGAACCCAAGGATTTTAATTCTTATGGAAGTCGTCGAGGCAATGATGAAGTGATGGCAAGGGGAACTTTTGCGAACATTCGCCTTGTTAACAAGCTCTTGAATGGAGATGTTGGCCCAAAGACAATTCATGTTCCAACTGGGGAGAAGCTCTATGTGTTTGAGGCAGCAACGAGATACATGGCTTCTGGGCAAGACACCATTGTGCTGGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCAATGCTACTGGGAGTCAAGGCTGTGATAGCTAAAAGTTTTGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCTCTTTGCTTCAAATCCGGTGAGGATGCAGACATATTGGGATTAACTGGTCATGAACGTTATACAATTGACCTCCCAAGTACAATCAGGGAGATTAGGCCTGGCCAAGATGTGAGAGTCACAACTGATAATGGAAAATCTTTTACCTGCACCATGCGCTTTGACACCGAGGTCGAACTTGCTTACTTCAACCACGGCGGCATACTTCCATATGTCATAAGAAACCTCATCAAGGATTGA 2949 0.4527 MYITTSSSSSSSLLGATTPKLLSSSPSRTFAFPPSFIPYSSCNSLRSYLPRWSHRLHHVSPLSLRPPIRAVAPAVERFHREIANTGNENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVKKEDVEKILAWEINSTKQVEIPFKPARVLLQDFTGVPVVVDLACMRDAMNKLGNDSNKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLYGKMRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRANKLFVDYNEPQQDRVYSSHLELNLSDVEPCISGPKRPHDRVPLKEMKADWHACLDNKVGFKGFAIPKEAQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKASELGLQVKPWVKTSLAPGSGVVTKYLHQSGLQKYLNEQGFHIVGFGCTTCIGNSGELDESVSSAISGNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTGENGKNVYLRDIWPSTEEIAEAIQSSVLPDMFRSTYEAVTKGNPMWNQLQVPADSLYSWDPNSTYIHEPPYFKNMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVEPKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGDVGPKTIHVPTGEKLYVFEAATRYMASGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADILGLTGHERYTIDLPSTIREIRPGQDVRVTTDNGKSFTCTMRFDTEVELAYFNHGGILPYVIRNLIKD 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01586 982 FunFam Aconitate hydratase 89 456 - -
Viun11g01586 982 ProSitePatterns Aconitase family signature 1. 517 533 IPR018136 -
Viun11g01586 982 SUPERFAMILY LeuD/IlvD-like 721 980 - -
Viun11g01586 982 Pfam Aconitase C-terminal domain 781 908 IPR000573 -
Viun11g01586 982 SUPERFAMILY Aconitase iron-sulfur domain 103 717 IPR036008 -
Viun11g01586 982 Gene3D Aconitase, domain 3 457 680 IPR015931 -
Viun11g01586 982 PRINTS Aconitase family signature 456 470 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 298 313 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 374 387 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 255 263 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 360 373 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 231 244 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 284 297 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 521 532 IPR001030 -
Viun11g01586 982 PRINTS Aconitase family signature 583 596 IPR001030 -
Viun11g01586 982 ProSitePatterns Aconitase family signature 2. 583 596 IPR018136 -
Viun11g01586 982 CDD AcnA_IRP_Swivel 758 928 IPR044137 -
Viun11g01586 982 NCBIfam aconitate hydratase AcnA 107 980 IPR006249 -
Viun11g01586 982 Gene3D - 681 742 - -
Viun11g01586 982 FunFam Aconitate hydratase 745 981 - -
Viun11g01586 982 FunFam cytoplasmic aconitate hydratase 457 680 - -
Viun11g01586 982 Gene3D Aconitase, domain 3 88 456 IPR015931 -
Viun11g01586 982 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 85 979 IPR006249 -
Viun11g01586 982 Gene3D Aconitase, domain 4 745 981 IPR015928 -
Viun11g01586 982 CDD AcnA_IRP 170 654 - -
Viun11g01586 982 MobiDBLite consensus disorder prediction 1 25 - -
Viun11g01586 982 Pfam Aconitase family (aconitate hydratase) 149 652 IPR001030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01586 Viun-Chr11 32223267 32232856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01586 K01681 - gmx:100778506 1801.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03085 5 41932061 41940838 Viun11g01586 11 32223267 32232856 PCT