Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01580 ATGTCTTGGGTCCTCCGATCTACGAAGTCTAAGGTTCTCTCTTCTTCCGCTTCTTCACTTTCCAGAACCTTCCCTTCCCTCTCCGGCGCCGTCCATCGCCTCCCTCACAATCAGATCGGAGCTCTCTCTCCCCTCACCGATCTCTTCCACCGCAACACCTCCTCCACGCCTCTCGCGAAGGAAAACGCTTCTGGCGGAAACTTGACTGGTCTTCCCAATGTTCTTGCAAATAAGCTTGGCTGTGATTCTAATGCGATCAATTCGTTGATGTACAAAGCTTCGGGGCTGGACACCACTGTGCTGTCTGGAGCTAGATATGGCACCAGAGTTTGTGCTTCACACAACCGAATACTATCGGGAGCCAATACTGTGATTGCTAGAAGTTTTGCGAGAAGTATGGAAGCTGGCACGTTGGGAATGATTGGTCATAAACGTTGCATGAGTGACGTCCCAAGTAAGAGGAGCGAGACAAACACATCTGGTTTTCGTCCGTTATCTCCTCATCTCCCTCTTTATCAGCCGCAACTTTCTTCAACTCTCTCAATTTTTAATAGAATTGCTGGAGCTTTCTTAGCTGGTGTCATTTTGCTTTTTTATATGATATATATAAAAATCGGTTCGGTTAGCCTCACCTATGACTCTTTCTACCAGTTCATATTTTATTCATCAAAACTAAACCTACTTGTCATGGAGATTTCTGCCTTAGCCGTGACCTACCATCTGTATAGTGCAATTCGTCACTTACGCTTATGA 753 0.4595 MSWVLRSTKSKVLSSSASSLSRTFPSLSGAVHRLPHNQIGALSPLTDLFHRNTSSTPLAKENASGGNLTGLPNVLANKLGCDSNAINSLMYKASGLDTTVLSGARYGTRVCASHNRILSGANTVIARSFARSMEAGTLGMIGHKRCMSDVPSKRSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYIKIGSVSLTYDSFYQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01580 250 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 163 248 IPR000701 GO:0016627
Viun11g01580 250 CDD SQR_TypeC_SdhC 163 248 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Viun11g01580 250 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 147 249 IPR034804 GO:0016020
Viun11g01580 250 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 136 248 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Viun11g01580 250 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 156 248 IPR034804 GO:0016020
Viun11g01580 250 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 148 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01580 Viun-Chr11 32187817 32191311 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01580 K00236 K03885 gmx:100527396 352.443