Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01562 ATGGCTTCATCACTTTTTATGCCTTCATCCATAGTGGAAGAAGAAGCGAGGTTCGAAGCAGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAAGCTAACCAAAAGGCCATACTCAGAGAGAGACGTGGTGTCCCTGAGAGGCAACCTGAGACAAAGCTATGGCTCAGGCGAGATGGCCAAAAAGCTATGGCGCATTCTGAAGAACCACCAAGCCAACGGCACAGCCTCAAGGACGTTCGGTGCACTCGACCCTGTTCAGGTCACTCAGATGGCGAAGCACTTGGACACAATCTACGTCTCAGGATGGCAGTGTTCAGCCACTCACACCACCACCAACGAGCCAGGCCCTGACCTCGCCGATTACCCTTACGACACAGTCCCCAACAAGGTGGAGCACCTCTTCTTCGCTCAGCAGTACCATGACAGGAAACAAAAAGAGGAGAGAATGAACATGAGCAGGGAAGAGAGGGCAAGGACCCCTTATGTTGATTACATGAGACCAATCATAGCAGATGGTGACACAGGTTTTGGTGGCACCACTGCAACTGTGAAGCTCTGCAAGCTCTTTGTGGAGAGAGGTGCTGCAGGGATCCACATTGAGGACCAGTCTTCCGTGACCAAAAAGTGTGGGCACATGGCAGGGAAAGTTCTGGTTGCCATCAGTGAACACATCAATAGGCTGGTGGCAGCAAGGCTTCAGTTTGATGTGATGGGGGTGGAAACTGTGCTGGTGGCTAGAACTGATGCAGAAGCTGCTAATTTGATTCAATCTAACATTGACACAAGGGACCACCAATTTATCTTGGGTGTGACCAACCCAAGCCTCAGAGGAAGAAGCCTGGCAGGTCTTATGGCAAAAGGCATGGCTGGTGGGAGAAGTGGGGCAGAGCTTCAGGCTTTGGAGGATGAGTGGCTGTCAAAGGCAGAGTTGAAGACTCTGTCAGAAGCAGTTATGGAAGCAATAGAGAAACAGGAGATTGGAGAGGAAGAGAAGAGAAGGAAGTTGAATGAGTGGATGCACCTTTCAAGCTATGAAAGGTGCATTTCCAATGAGGAAGGTAGGGAAATTGCAGAGAGGTTAGGAGTGAGGAAGTTGTTTTGGGATTGGGATTTACCTAGGACAAGAGAAGGGTTTTACAGGTTCAAAAAGTGTGTAACAGCATCAGTTGTGAGAGGTTGGGCTTTTGCTCCACATGCTGATGTGATATGGATGGAAACTGCAAGGCCTGATGTGGGGGAGTGCAGAGAGTTTTCTGAGGGGGTTAGATCAAAGCACCCTGAGATGATGCTTGGGTATAATCTGTCTCCATCTTTCAATTGGGATGCTTCTGGCATGAGTGATGAGGAAATGAGAGAGTTCATTCCCAAGATTGCAAAGTTGGGGTATGTGTGGCAGTTCATCACAGTTGGGGGTCTGCATTCTAATGCACTCATCACTTCAACATTTGCAAGAGACTTTGCCAAGAGGGGCATGCTGGCTTATGTTGAGAAGATTCAGAGAGAGGAGAGGAACAATGGAGTTGACACACTTGCTCATCAGAAATGGGCTGGTGCTAACTACTATGACAGATACCTCAAGACTGTCCAAGGAGGTGTGGCTTCAACTGCTGCAATGGGAAAAGGAGTAACTGAAGAACAGTTTAAGGAATCATGGACTAGGCCAGGAGCTGTTGATATTGGTGGAGGCACTATTGTGGTTGCTAAGGCCAGAATGTGA 1728 0.4884 MASSLFMPSSIVEEEARFEAEVAEVQAWWNSERFKLTKRPYSERDVVSLRGNLRQSYGSGEMAKKLWRILKNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQKEERMNMSREERARTPYVDYMRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPSLRGRSLAGLMAKGMAGGRSGAELQALEDEWLSKAELKTLSEAVMEAIEKQEIGEEEKRRKLNEWMHLSSYERCISNEEGREIAERLGVRKLFWDWDLPRTREGFYRFKKCVTASVVRGWAFAPHADVIWMETARPDVGECREFSEGVRSKHPEMMLGYNLSPSFNWDASGMSDEEMREFIPKIAKLGYVWQFITVGGLHSNALITSTFARDFAKRGMLAYVEKIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKESWTRPGAVDIGGGTIVVAKARM 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01562 575 NCBIfam isocitrate lyase 22 551 IPR006254 GO:0004451|GO:0019752
Viun11g01562 575 Gene3D - 262 377 - -
Viun11g01562 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 12 535 IPR015813 GO:0003824
Viun11g01562 575 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
Viun11g01562 575 Pfam Isocitrate lyase family 21 551 IPR006254 GO:0004451|GO:0019752
Viun11g01562 575 FunFam Isocitrate lyase 262 377 - -
Viun11g01562 575 PIRSF ICL 12 283 IPR006254 GO:0004451|GO:0019752
Viun11g01562 575 PIRSF ICL 368 554 IPR006254 GO:0004451|GO:0019752
Viun11g01562 575 Gene3D - 17 535 IPR040442 -
Viun11g01562 575 CDD ICL_PEPM 66 257 IPR039556 GO:0003824
Viun11g01562 575 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 556 IPR006254 GO:0004451|GO:0019752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01562 K01637 - gmx:100782793 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01562 11 31952529 31955364 Viun11g01562 11 31952529 31955364 ECH