Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01545 ATGTTGAAGTTCTGTTACAACAATGGAACAGCTGATATAAGTCCTTCGAATTTGTTCCTTGCGCGTTGTGCTGCTGAGTACATGGAAATGAAGGAACCTGTGGCTGATGTATGTAACTTATTGGAGCTAACTGAAAAGTCACTCCATGAGATCAACTATTGGACTTGGTCAGATGTTTTGATTGCTCTGAAGCAGTGCCAGAATTTGGTAGTTCTAGATTGTTCGGAGATGGTAGAAAGATGCTTGGACACTATTGTGGGGAGGCTGGTTTTGGCTAGTGAAGCAAGTCCTTGTCCATCAACTAGTTCCACAGATAGTTCTTGGATTCGGTTTTCATGTGACTCTAAGAGCACTGAGAGTGTAAAAACAAGTTTCACTCGTTTGACATGGTGGTTTGAAGATCTCCTTTTTTTCAGTCCCTTGTTGGTTGCAATGTTGGTTAAGTCAATGCTTTTGCGAAAGATGGACCATGTTTTGATCAGTAAGTTTCTTCTCTACTATCAGAAGGCTAAATTTTCCACTTCTACTACAGAGGAGAAGAGCAAGATAATAGAAATGGTCATAGATATGCATTATGGTATGGATCTAAGTTGTGTTCCTTGCAAGACTTTGTTTGGGATTCTGAGGGTTACTTTAGGTTTAAATATAAGCAAATGTAGCAGGAACAAGTTGGAGACTATGATTGGTTCCCAATTGGATCAAGCAACCCTGGACAATTTGCTTGTTCCATCTCCTTATGGAATAAGCTACTTGTATGATGTGAACCTTGTTTTGAGAATTTTGAAGGCATTCTTGCGAAGAGGAAATGGTGCAGTCACTCCCATTCGGATGAAGAAAGTTGCTAGCTTAATAGATTTGTACACAGCAGAAATAGCCCCTGATCCTTGTTTGAAAATTTCCAAGTTCTTGGCTCTTGCCACAGCACTTCCAGATTCTGCAAGAGATTCTTATGATGAGATCTACCATGCAATGGACATGTATCTTGAGGTACATGCTCAATTGTCACAGGAAGAACGAGTGAAGATATGCTGTGTTTTAAACTATGAGAAGCTTTCACCTCAAGCTTGCATACACCTATCTCAGAACAAGAAATTTCCTTCAAAATCCGCAGTTCAGGCTCTTATCTCTCAACAATCTAAGCTAAAAAATTTACTCCATGTTACTCCCAGTACAAGTTCATACAACGATTCACCTTGCAGCTCCAGTGGGGCTGCTCAAAAGGTAAAGAAAGATAAAACCAGTGAACAGGTTGTGTTGTATGCTGGAAATTTTGATCTTTCTACCGATAATGAGAAACTCAAAGCACATTTACAAGGAATGCAGTGGAGGGTCATGGAATTAGAGAAATTCTGTAGAAAAATGCAAGTCCAAATGGCAAAGATCACAAAATCAAAAGCATCAGGCAATAGTTATGCAAAATCTTTGCCAAAGCTATGCTCATGA 1443 0.3957 MLKFCYNNGTADISPSNLFLARCAAEYMEMKEPVADVCNLLELTEKSLHEINYWTWSDVLIALKQCQNLVVLDCSEMVERCLDTIVGRLVLASEASPCPSTSSTDSSWIRFSCDSKSTESVKTSFTRLTWWFEDLLFFSPLLVAMLVKSMLLRKMDHVLISKFLLYYQKAKFSTSTTEEKSKIIEMVIDMHYGMDLSCVPCKTLFGILRVTLGLNISKCSRNKLETMIGSQLDQATLDNLLVPSPYGISYLYDVNLVLRILKAFLRRGNGAVTPIRMKKVASLIDLYTAEIAPDPCLKISKFLALATALPDSARDSYDEIYHAMDMYLEVHAQLSQEERVKICCVLNYEKLSPQACIHLSQNKKFPSKSAVQALISQQSKLKNLLHVTPSTSSYNDSPCSSSGAAQKVKKDKTSEQVVLYAGNFDLSTDNEKLKAHLQGMQWRVMELEKFCRKMQVQMAKITKSKASGNSYAKSLPKLCS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01545 480 MobiDBLite consensus disorder prediction 389 407 - -
Viun11g01545 480 Pfam NPH3 family 129 356 IPR027356 -
Viun11g01545 480 PANTHER OS12G0117600 PROTEIN 2 457 IPR043454 -
Viun11g01545 480 MobiDBLite consensus disorder prediction 389 408 - -
Viun11g01545 480 ProSiteProfiles NPH3 domain profile. 129 380 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01545 Viun-Chr11 31691182 31693737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01545 3 460 EF-hand Containing Proteins AT3G44820 27.626 8.13e-49 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01545 - - gmx:100784792 857.055