Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01488 ATGAAACAAAGAAGTTGCAAGGAGTTAAGAAGCAACGTTAATGGCTTCGAAGGAGACGATGAAATGAAGAAACTTGATTCCCATATTGTTCCTAAAAGACTCACCTTGAACGAAAATAAAGCATCATTTAAAGAAACTTTCATTATTGTAAGAATTGAATTGATTAAGAATCAGATACCACATTCTCTGGCAAGAACATGGATTTCGAGAGAAGAGGGTGATAAGGTTTTTTCTAAATACATGGGAACAAAAGGGGGAGATTCTCATGACTCATGGGTGGCGAAGACGCACAAAGCGGTGAAGAAAGCTAACAATTCTGTTCTTGGGTATGTGAGTTCCAAGTCTCACTGGGCATTGTCTCATAGCCATATTAGCCTGAGGGCACCACAACCCAAAAGTGTGGAGAAGATTGTGAGCAAGGGCATTGATCTCTTCAGACACAAGAAACCTTTAAATATTGAGTTGGTTCATCAACTACGTTTGCTTGATAATCATTTCATTCAATGGCGATTTGCAAATGCAAGAGCTTGTGCTGTGAATCACACCATTTTCCTCAAAGTTTGGGGCACTTTCATATGTGCTTTGAATAGTCAAGCCAAATTGCGATATTCACTAGTACTAACGAAAATAGAGATAGAGAGAGAGAAGCTTGAGATGAAACTGGAGGGTATACTGCAATCTCAAATGAAGCTATTGAAAACATGGAGATCTATGAAAAAGCCATATGTAGCTGCAATCACCTTATTGCAAGAATGTTTGTATTCTGTTGCATGCAGAGTTCATCTTTTAGAAGGTGCAAAGGTGGATTTGAAATTAGCATCTGGTTATGAAAAGCGTGCATTGAATCTAACAAATTCCATGAATTCACTTTTGTCTACTTATTTACCCTTGGCTGACGAGATTGCTGGATTGCTATCAGAATTAGCAAAAGTTGTTGTACAGGAGAAGTTTCTCTTACAGGAATTCAATGACATGTTCCACACCATATGTCTCCTTCAGCTTGAAGAAAGCAGCCTAAGGTGCAGTCTTATTCAACATAATTCTTGA 1047 0.383 MKQRSCKELRSNVNGFEGDDEMKKLDSHIVPKRLTLNENKASFKETFIIVRIELIKNQIPHSLARTWISREEGDKVFSKYMGTKGGDSHDSWVAKTHKAVKKANNSVLGYVSSKSHWALSHSHISLRAPQPKSVEKIVSKGIDLFRHKKPLNIELVHQLRLLDNHFIQWRFANARACAVNHTIFLKVWGTFICALNSQAKLRYSLVLTKIEIEREKLEMKLEGILQSQMKLLKTWRSMKKPYVAAITLLQECLYSVACRVHLLEGAKVDLKLASGYEKRALNLTNSMNSLLSTYLPLADEIAGLLSELAKVVVQEKFLLQEFNDMFHTICLLQLEESSLRCSLIQHNS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01488 348 Coils Coil 207 227 - -
Viun11g01488 348 Pfam QWRF family 109 320 IPR007573 -
Viun11g01488 348 PANTHER AUGMIN FAMILY MEMBER 94 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01488 Viun-Chr11 31075591 31077252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01488 - - vra:106780229 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01488 11 31075591 31077252 Viun11g01488 11 31075591 31077252 ECH
Viun5g02974 5 41055843 41059007 Viun11g01488 11 31075591 31077252 PCT