Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01444 ATGGAGAAGATTCAGCACAGTGAGGTGGAAGTGAAGGGACTGAAGCTGCATGTGGCAGAGGTTGGAACTGGGTCCAAGGCAGTGCTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTGTGGCAAACGCTGGCTATAGGGCTATTGCTTTTGATTTCAGAGGGTATGGGCTCTCTGAGCAACCAGCTGAGCCAGAAAAGGAAACCATGTATGACCTAATTGATGAAATAGTGGGTCTTTTGGATGCCTTAAACATAACCAAGGCTTTCCTTGTTGGCAAGGATTTTGGGGCAATCGTTGCATATCGTACAGCAGCTGTGCACCCAGAAAGATTTGGTGCTGTAATAACTTTAGGCATTCCTCCTGGTTCCTATGCTACCCAAAACCACCGTCTCCCCAAAGGCTACTACTTTAATAGGTGGCAAGAGCCTGGGAGAGCAGAAGCGGATTTTGGCCGGTTTCCTGTGAAATCAGTGATAAGGAACATCTACACTCTCTTCTCTAAAAGTGAGGTTCCAATAGCAGCTGATGATCAAGAAATCATGGACTTGTTTGACCCGTCTACCCCTCTACCACCATGGTTCTCTGAGGAAGACCTTTCAACCTATGCATCTTTATATGAAAAATCTGGATTCAGATACACATTGCAGGTTCCTTACAGGAGTCTCAATGTGGAAACGGGCTCAAGGGACGTGAAGGTTACAAATCCAGCACTTCTCATCATGGGTGAGAAAGATTATGTTTTCAAGTTTCCAGGTACGGAGGACTATATCCGAAGTGGGGCAGTGAAAAATGCTGCGCTGGACTTGGAAATCACATATATTCCGGAGGGAAGCCATTTTGTGCATGAACAAATTCCAGACAAGGTGAACCAGCTCATCATTGAGTTCATTGACAAACAAAGTATCTGA 933 0.4555 MEKIQHSEVEVKGLKLHVAEVGTGSKAVLFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSEQPAEPEKETMYDLIDEIVGLLDALNITKAFLVGKDFGAIVAYRTAAVHPERFGAVITLGIPPGSYATQNHRLPKGYYFNRWQEPGRAEADFGRFPVKSVIRNIYTLFSKSEVPIAADDQEIMDLFDPSTPLPPWFSEEDLSTYASLYEKSGFRYTLQVPYRSLNVETGSRDVKVTNPALLIMGEKDYVFKFPGTEDYIRSGAVKNAALDLEITYIPEGSHFVHEQIPDKVNQLIIEFIDKQSI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01444 310 Gene3D alpha/beta hydrolase 1 309 IPR029058 -
Viun11g01444 310 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Viun11g01444 310 PRINTS Epoxide hydrolase signature 52 67 IPR000639 GO:0003824
Viun11g01444 310 PRINTS Epoxide hydrolase signature 98 111 IPR000639 GO:0003824
Viun11g01444 310 PRINTS Epoxide hydrolase signature 112 125 IPR000639 GO:0003824
Viun11g01444 310 PRINTS Epoxide hydrolase signature 32 50 IPR000639 GO:0003824
Viun11g01444 310 PRINTS Epoxide hydrolase signature 243 259 IPR000639 GO:0003824
Viun11g01444 310 Pfam alpha/beta hydrolase fold 27 257 IPR000073 -
Viun11g01444 310 PRINTS Alpha/beta hydrolase fold signature 98 111 IPR000073 -
Viun11g01444 310 PRINTS Alpha/beta hydrolase fold signature 112 125 IPR000073 -
Viun11g01444 310 PRINTS Alpha/beta hydrolase fold signature 52 67 IPR000073 -
Viun11g01444 310 PANTHER EPOXIDE HYDROLASE 5 307 - -
Viun11g01444 310 SUPERFAMILY alpha/beta-Hydrolases 2 307 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01444 Viun-Chr11 30600634 30605520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01444 1 307 Acyl Lipid Metabolism Gene Families AT4G02340 36.025 4.79e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01444 - - gmx:100812544 546.584