Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01396 ATGGCCAAAGAATTCTTCACCGGTTCGGCCACTGGCCGGAGCTCCGACGAAGTGAGTTTTGCGGATATAGTTTTTGAGAGCTGGGATTCATTCGATTCCAATAAAGACGACGATGTTGGTGAGAACAACAACAACAACAACGATGATGATTCTGTCTGTGCTTCATCAGAAAAGTGTAAGGCCTTTTGGGAGGAAAAAGATCAGCTTCTTAAGGGAATTTTGTTCAGGACTAGTTCATGTGAGAAAAAAGTTAGAGAAGCAACGAAGGAGGTTGTGAGAGAAATGAATGATTCTGTGATGGTGTGTAGTTGCCAGCTGCAAGTGGTGGCTAAGAGTTGCAGGAACTGCATGCTGAGAGAACTGTGTGATCGATTGTTGAACCTTGGCTACAACTGTGCCATTTGCAAGTCTAAATGGAGGAGTTCATCAGAAATCATATCAGGGGAGCACACATATTTGGAAGTGAGAGATGATTTATCAAAGAGCAAAAGAGAAGTGAAAGTGGTGATTGAACTGAGCTTTAGGGGTGAATTCGAGATGGCATGTGCGAGTGAAGAATACAAGCAATTGATTAAGCGATTGCCAGAAGTGTTTGTGGGGAAAGCAGAGAGGTTAAGAGCATTGGTGAAGATTATGTGCTCAGCTGCTAAAAGGTGCATGAAGGAGAAGAAAATGCACATTGGGCCATGGAGGAAACACAAGTACATGCAAGCTAAGTGGTTTGGCTCGTGCGAAAGCTCCACAATGGAACCACTTCTGGTAATGAACTTTGCTACTCGCCGACCAAAACCTAAGACTTCAATGTTGACTTTTGATTTATTATTGGATAACATTCAAGGCTTGCACTGTACTACAGTTGAAGTAGTGTGA 870 0.4299 MAKEFFTGSATGRSSDEVSFADIVFESWDSFDSNKDDDVGENNNNNNDDDSVCASSEKCKAFWEEKDQLLKGILFRTSSCEKKVREATKEVVREMNDSVMVCSCQLQVVAKSCRNCMLRELCDRLLNLGYNCAICKSKWRSSSEIISGEHTYLEVRDDLSKSKREVKVVIELSFRGEFEMACASEEYKQLIKRLPEVFVGKAERLRALVKIMCSAAKRCMKEKKMHIGPWRKHKYMQAKWFGSCESSTMEPLLVMNFATRRPKPKTSMLTFDLLLDNIQGLHCTTVEVV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01396 289 Pfam PDDEXK-like family of unknown function 29 245 IPR006502 -
Viun11g01396 289 NCBIfam uncharacterized plant-specific domain TIGR01615 120 245 IPR006502 -
Viun11g01396 289 PANTHER OS03G0796600 PROTEIN 18 251 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01396 Viun-Chr11 30037390 30039171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01396 - - gmx:100815222 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01396 11 30037390 30039171 Viun11g01396 11 30037390 30039171 ECH
Viun5g02926 5 40663202 40666079 Viun11g01396 11 30037390 30039171 PCT