Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01391 ATGGAGCTCACTATTACACAACCTGATGATTGGCATCTTCACCTTCGTGATGGTTCTCTTCTTGAAGCTGTTCTCCCTCACAGTGCTAAGAATTTTGGAAGGGCTATAGTGATGCCAAATTTGAAACCACCCATCACTACCACATCTGCCGCTGTCACATATCGAGAGTCCATTTTGAAAGCAATACCTAGAGATAGCAACTTCACTCCTCTCATGACACTTTACCTCACAGACTTGACTACGCCTGATGAGATTAAACTTGCAAAAAAAAGTGGACTTGTGTATGGTGTGAAGTTGTATCCTGCTGGTGCCACTACGAATTCCCAAGACGGTGTTACAGATCTTTTTGGAAATTGTTTTTCTGTTCTCGAGGAAATGGTTGAGCAAAATTTACCATTATTGGTTCATGGAGAGGTTACAAATTCAGACGTAGATATTTTTGACCGAGAAAAGGTATTTATTGAAACAATTTTGAAGCCTTTAGTTCAAAGGCTTCCACAGCTGAAGGTTGTGATGGAGCATATTACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTTCGTAGCAGCAACCGTAACACCGCAACATCTTCTTCTTAATCGTAATGCTTTGTTCCAAGGTGGTTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCACAGACAGGCTATTGTTTCGGCTGTTACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCACCACATGATAGGCGGAGAAAGGAATGTTCATGTGGATGTGCTGGGATATACAACTCCCTGGTAGCTCTATCAATATATGCCAAGGTTTTTGAAGAGGCCGGTGCACTTGATAAGCTGGAGGCTTTTACAAGCTTCAATGGACCTGACTTCTATGGCCTCCCTAGAAATAAGTCAAAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCAGATTATTTGTCATTTCCATTTGGAGACATTGTTCCCATGTCTGCTGGTGAAATCCTTGAATGGGAGGCATTGCCTTGTTGA 1041 0.4169 MELTITQPDDWHLHLRDGSLLEAVLPHSAKNFGRAIVMPNLKPPITTTSAAVTYRESILKAIPRDSNFTPLMTLYLTDLTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCFSVLEEMVEQNLPLLVHGEVTNSDVDIFDREKVFIETILKPLVQRLPQLKVVMEHITTADAVKFVESCKEGFVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRRKECSCGCAGIYNSLVALSIYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKAPWKVPDYLSFPFGDIVPMSAGEILEWEALPC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01391 346 Gene3D - 1 343 - -
Viun11g01391 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Viun11g01391 346 Pfam Amidohydrolase family 10 321 IPR006680 GO:0016787
Viun11g01391 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Viun11g01391 346 NCBIfam dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
Viun11g01391 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Viun11g01391 346 PANTHER DIHYDROOROTASE 1 342 IPR004721 GO:0004151|GO:0019856
Viun11g01391 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Viun11g01391 346 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
Viun11g01391 346 FunFam Dihydroorotase 1 344 - -
Viun11g01391 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01391 Viun-Chr11 29994791 30000268 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01391 K01465 - gmx:100815210 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01391 11 29994791 30000268 Viun11g01391 11 29994791 30000268 ECH