Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01296 ATGGAGCCACGTCCTCTGCACATAGCTATGTATCCATGGCTGGCCATGGGTCACCAAACAGCATTTCTCCACCTATGCAACAAGTTAGCCATAAGGGGTCACAGAATCTCCTTCATCACACCCACAAAAGCACAAGCCAAGTTGGAACCATACAACTTGCATCCTCACTTGATCACGTTCGTCACCGTCACAGTTCCTCACGTTGAAGGTCTTCCTCCTGATGCACAAACCACTGCAGATGTCACTTACCCTTTGCAACCAAACATCATGACAGCCATGGATCTCACCAAAGATGACGTAGAGACCCTTCTCACTGATCTCAAACCTGAACTTGTTTTCTATGACTTCACGCATTGGATGCCAACCTTGACCAAGAAATTAGGGATCAAGGCTGTGCACTATTGCACTGCTAGCTCTGTCATGATTGGTTACACTCTTCCACCAGCCAGATATTACCAAGGGATTGACCTATCAGAAAGTGACCTCATGGAACCCCTGAAGGGGTACCCAGACTCGTCCATCAAGCTTCATGCTCACGAGGCTCGTGCCTTTGCGGGGAAAAGAAAGGACACGTTCGGGAGCGATGTTCTCTTCTACGATCGCCAATTCATCGCACTGAATGAAGCTGACGTGTTGGCATACAGAACATGCAGAGAAATCGAAGGGCCATATCTTGATTACATCGGAAGCCAGTTCAAGAAGCCCGTGCTTGCAACCGGTCCAGTTATTCTGGAGCCACCAACCTCCGAGTTGGAGGAAAAATTCGCCACATGGCTCGGAGGGTTCGAGGCAGGGACAGTGGTCTATTGTTGTTTTGGGAGCGAATGCACTTTGAGACCTGAGCAGTTCCAGGAGCTGGTGCTTGGTCTCGAGCTCACCGGCAAGCCATTCTTGGCAGCAGTGAAGCCCCCGGTGGGGTTCGAGACGGTGGAATCAGCCATGCCGGAAGGGTTTGAAGAAAGGGTTAAAGGAAGAGGGTTTGTGTATGGAGGGTGGGTTATGCAACAGTTGATTCTTGCACACCCTTCTGTGGGGTGCTTCATCACACATTGTGGTTCTGGTTCTTTGTCTGAGGCACTGGTGAACCAGTGTCAGCTGGTGCTGCTGCCCAATGTTGGTGACCAGATTCTGAATGCGAGGATGATGGCGAACAACTTGGAGGTTGGTGTGGAAGTGCAGAAAGATGAGAATGGACATTACACGAAGGAGAGTGTGCGCAGTGCTGTGAGCATTGTGATGGATGAGGAGAATGAAAGTGGTAAGAAGGTGAGGGATAATCACACTAAGCTCAGAGAAACACTCCTTGACAAAAATTTGGAGTCTTGTTATCTTGACAACTTCTGCATGAGCCTCCAAGAGATTGTTGATAAAAGAGTTTAA 1380 0.4913 MEPRPLHIAMYPWLAMGHQTAFLHLCNKLAIRGHRISFITPTKAQAKLEPYNLHPHLITFVTVTVPHVEGLPPDAQTTADVTYPLQPNIMTAMDLTKDDVETLLTDLKPELVFYDFTHWMPTLTKKLGIKAVHYCTASSVMIGYTLPPARYYQGIDLSESDLMEPLKGYPDSSIKLHAHEARAFAGKRKDTFGSDVLFYDRQFIALNEADVLAYRTCREIEGPYLDYIGSQFKKPVLATGPVILEPPTSELEEKFATWLGGFEAGTVVYCCFGSECTLRPEQFQELVLGLELTGKPFLAAVKPPVGFETVESAMPEGFEERVKGRGFVYGGWVMQQLILAHPSVGCFITHCGSGSLSEALVNQCQLVLLPNVGDQILNARMMANNLEVGVEVQKDENGHYTKESVRSAVSIVMDEENESGKKVRDNHTKLRETLLDKNLESCYLDNFCMSLQEIVDKRV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01296 459 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Viun11g01296 459 FunFam Glycosyltransferase 2 254 - -
Viun11g01296 459 FunFam Glycosyltransferase 255 436 - -
Viun11g01296 459 CDD GT1_Gtf-like 6 432 IPR002213 GO:0008194
Viun11g01296 459 PANTHER GLYCOSYLTRANSFERASE 6 448 - -
Viun11g01296 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 416 IPR002213 GO:0008194
Viun11g01296 459 Gene3D Glycogen Phosphorylase B; 256 436 - -
Viun11g01296 459 Gene3D Glycogen Phosphorylase B; 1 255 - -
Viun11g01296 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01296 Viun-Chr11 27890655 27892866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01296 6 455 Glycosyltransferase AT5G54010 46.785 2.34e-155 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01296 K22794 - gmx:100780270 811.216