Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01122 ATGAAAAGAGAGTGTCATCCACTGTTAAGGGGAGGAAGAGGAGGTAGCAAGTATAATCATGGATTTTCTGCAGCTGAAATGGAGTCACTGGCAAGTATATGTGATGTTGTGTTGCCTCCTTTGCCTGTGAATGCTTTGAAGAGCAGAAAACAAGACCAAGCTGGTGATGATGACAAGTTTCTGCAGTCCTTCTGTGACATTTCTGGTTCTCGCTATCCAATCCCTCATGAGGTTGCTGAGTTACTCACAAAGAGGAGTTTAATAGAAGCAAAAATACTTGTAAGAGTGGTTTTATGGCTGCTGGCTACAAGGTTGGGAACCTTGCTGCTTTGTGGTTTCCTCTGTCTTGGTGAGAAATGGCCCTATATCAACAACTTTCCAAACATGTCTTTGGAGAAGAGAGAAAAGGTTATGCAGCAGTGGATGAAGCATAGGTTCCTCACACCTATTAGACTGGCATTTGTATATGTCAAAGTCTTGTGCCTTTTTGCATTTTTCTCTTGGGTTGATGAAAATGGTGATAACCCAGCATGGAAAGCCATTGGATACGAGGTATCAAAGGATGAGAAACTGAACAGCGTCTCCAACAATAGGCCCCTTGAAAAGGGGACTATAGAAATCATGCATGAATCTGACTCAACTCTTCAACAATCTCTTGCCAAGAAAGGCCTCAATGTTGAACTGGACTTCAAAAGCAACATCCTCAAAGTCAAATGTGATGCAGTAGTTGTTGGGTCTGGTTGTGGCGGAGGTGTTGCAGCTGCTGTTCTTTCGAAAGCTGGTCACAAGGTGGTTGTTCTTGAGAAAGGAAACTATTTTGTTCCTCAGGATTATTCATCACTAGAAGGTCCCTCCATTAAGCAACAATATGAAACTGGTGGGATTCTTGCTTCCGCAGACTCCAGAATACTGGTTTTGGCAGGATCAACAGTGGGAGGTGGCTCTGCTGTTAATTGGTCAGCCTGCATTAAAACACCACACAAGGTGCTGAAAGAGTGGTCTGAGGACCACAAACTTCCCTTCTTTTCAAGCCAAGAATATCTCTCTGCAATGGAGTCTGTATGTGAAAGGATTGGAGTCACAGAAAACTGCACACAAGAGGGATTCCAAAATCAAGTGCTGAGAAAAGGGTGTCAGAATCTTGGCCTCAAAGTTAACTATGTGCCGAGAAACTCTTCAGGGAATCATTACTGTGGCTCATGTGGTTATGGCTGTGCAAAAGGAGAGAAACAAGGGACTCAAGCTACTTGGCTTGTAGATGCAGTTGACAAAGGTGCAGTAATAATAACAGGATGCAAAGCTGAGAGGTTCTTGTTGGAAAGCAACAGGAGTGGAAATGGAAGAAAGAAGAAATGCTTGGGAGTGCTGGCAAAAGCATTGAACAACCGAGTCAGGATGAAGCTACAAATTGAGGCTAAAGTTACAATTTCCTCTGGTGGGGCACTTTTGACACCACCTTTATTAATCTCTAGCGGACTGAAAAACAAAAACATTGGAAGGAACCTCCATCTCCACCCTGTCCTAATGGCATGGGGATACTTCCCAAAATCAGATAATTCAGAATTTATGGGGAAATCCTATGAGGGAGGTATAATCACATCAATCCATAAAGTGCCATCAACAGACTCCAAATCTGATTCAAGAGCCATAATTGAAACCCCTTCACTAGGACCAGCATCATTTGCTGCACTGTTTCCTTGGGAGTCAGGACTAGACTTCAAAGAAAGAATGTTGAATTACCCAAGAACTGCACATTTAATCACAATTATTAGAGACATGGCTAGTGGAAAGGTGACATCAGAAGGAAGGATCAGCTACAAGTTGAATGAATTTGACAGAGAAAACGTGAGGGCTGGCTTGCAACAAGCACTGAGGATTCTAATAGCTGCAGGAGCAGTTGAGGTAGGCACGCACAGAAGTGATGGCCAGAGACTCAGGTGTAGTGGCATTAGTGAAAATGAGATGCAAGAGTTCTTGGACAGTGTGTGTCCAATGGAAGGAGCACTTTCACCAGGTGAGAAATGGAACATATATACTTCTGCACATCAAATGGGGAGCTGCAGAATGGGGGTCAATGAAAAAGAAGGTGCAATTGATGAGAATGGACAGACATGGGAGGCTGAAGGGTTGTTTGTTTGTGATGCTAGTGTGCTTCCAACTGCAGTTGGAGTCAATCCCATGATCACAATCCAATCAACTGCATACTGTATCTCTAATAGAATAGTGGACTACCTTGGAAGAACTCAAATCTCACATGTTCCTTGA 2265 0.4331 MKRECHPLLRGGRGGSKYNHGFSAAEMESLASICDVVLPPLPVNALKSRKQDQAGDDDKFLQSFCDISGSRYPIPHEVAELLTKRSLIEAKILVRVVLWLLATRLGTLLLCGFLCLGEKWPYINNFPNMSLEKREKVMQQWMKHRFLTPIRLAFVYVKVLCLFAFFSWVDENGDNPAWKAIGYEVSKDEKLNSVSNNRPLEKGTIEIMHESDSTLQQSLAKKGLNVELDFKSNILKVKCDAVVVGSGCGGGVAAAVLSKAGHKVVVLEKGNYFVPQDYSSLEGPSIKQQYETGGILASADSRILVLAGSTVGGGSAVNWSACIKTPHKVLKEWSEDHKLPFFSSQEYLSAMESVCERIGVTENCTQEGFQNQVLRKGCQNLGLKVNYVPRNSSGNHYCGSCGYGCAKGEKQGTQATWLVDAVDKGAVIITGCKAERFLLESNRSGNGRKKKCLGVLAKALNNRVRMKLQIEAKVTISSGGALLTPPLLISSGLKNKNIGRNLHLHPVLMAWGYFPKSDNSEFMGKSYEGGIITSIHKVPSTDSKSDSRAIIETPSLGPASFAALFPWESGLDFKERMLNYPRTAHLITIIRDMASGKVTSEGRISYKLNEFDRENVRAGLQQALRILIAAGAVEVGTHRSDGQRLRCSGISENEMQEFLDSVCPMEGALSPGEKWNIYTSAHQMGSCRMGVNEKEGAIDENGQTWEAEGLFVCDASVLPTAVGVNPMITIQSTAYCISNRIVDYLGRTQISHVP 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01122 754 Pfam GMC oxidoreductase 603 736 IPR007867 GO:0016614
Viun11g01122 754 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 17 748 - -
Viun11g01122 754 SUPERFAMILY FAD/NAD(P)-binding domain 238 747 IPR036188 -
Viun11g01122 754 PIRSF Lg_Ch_AO 8 750 IPR012400 GO:0046577
Viun11g01122 754 Pfam GMC oxidoreductase 240 507 IPR000172 GO:0016614|GO:0050660
Viun11g01122 754 Gene3D - 580 744 IPR036188 -
Viun11g01122 754 Gene3D - 226 538 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01122 Viun-Chr11 24512632 24517279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01122 80 752 Acyl Lipid Metabolism Gene Families AT3G23410 64.697 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01122 K17756 - gmx:100776182 1293.49