Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01118 ATGGCCTTCTTTTGCTTGGAGTTTGCTGATCCTGTTGTTGCAGAAGCAACGCTTGAATTTCTCATCAACAACAAGAAGAAGCTTCTAACTTCCTTCCCTAACTTATTACCTCAGTTTTTTCCATTGTTATTAAAGTTGATTGCTTGGAATGGTGAAAGATTAGAGAAACTATTTTTGAAAGCCTTCCCAGCCTTGATGTCACCTGGGTCATTTCTTCCCTTATTTCCATCTTTAGTTGACTTGCCAATTTTGGTAGTAGCATTGGAAAAGGTGGAAAAAAGCTCTGGACCCTTAATTGGGAGCAGCATAGCTTCTATTCAGAAAAATACTGCCCCTAAGATGCTACTTGCTCTTATGGATGAGGCATATACAGGTTCAACTATAGAAGATGGCGTAGGAGATTCTGAGTATGAGGATAATAGTGCAATTGATGTTGCTGATCCATTGTTCCTTGAACTTTTGAAGGATGAAAATGATGGTATCGCTGAACGTCCCTGGTCATCTCCAGTGATGACTGCAATATTACAGGCTTCAGTCAATAGTCCTTACTCTGATAAGCTGAAAGCAGTACTTAGCTTGACTCCTCGTCTTCTTGATGTGTACTTCTCCGTAGCATTGCAAACTGTCAATAATTCTCTGATTTGTGCATTGATTCCCCTGCTCATGTCAAGATATGCTACAATATTTCCGGACAAAATATTTTCGTATGAGGTCCGCAAGCGACTTTTGGAGTTTATGCTCTCAACGTTTCAGGGTTCACCAAACTTCATTGCCCTTTTAAAGAAACCTATAATGGACAGACTTGGAGAAGCTTATGACAGCCCAGTCAAGACAGAATTAGCCTTGCAACTATGTTGGGCCATTGGGGAGCATGGTGGAGGTGGTGGATCTCACAAAGATGAAGCCCGTGAGCTTTTTGAGAGTCTAGAACTGCTTCTGTATGAAAACCTTTCCTCAAGTCGTGTGGGCATGACACAGGAGGTATCCCTTGGTCATGATAAGGATACTTACAGAAGGTCATCGCAGTCCAGGCTTTTATGTTTTGTTGTGACAGCCATAGCAAAGCTTGCTACACATCATCGAGAGTTAATACCAAGAGCACGTGTATCCTTGGGCAAGGTGGCTCGGTCTCGAATTTCTGATGCTAGAGTATGGAGGCGTGCATGTGATTTCCTGGGTTTGATGAAAGACCCTGCTATATGTTCATCCATATTGGGGCCTTCGCGACCTACACAAGGTACAGCGCAGAAAGTTGGCAGCATAAACTGGAGTGAAGGTTCAACGAAGATGATTGCACATATTCCATTTTACATTCTAGGGGAACAAGAAGGGCCACCTTTTCATGATTTCTCATTTTCAGATATCATTCCCAAAAGATAA 1380 0.4225 MAFFCLEFADPVVAEATLEFLINNKKKLLTSFPNLLPQFFPLLLKLIAWNGERLEKLFLKAFPALMSPGSFLPLFPSLVDLPILVVALEKVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGVGDSEYEDNSAIDVADPLFLELLKDENDGIAERPWSSPVMTAILQASVNSPYSDKLKAVLSLTPRLLDVYFSVALQTVNNSLICALIPLLMSRYATIFPDKIFSYEVRKRLLEFMLSTFQGSPNFIALLKKPIMDRLGEAYDSPVKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRVGMTQEVSLGHDKDTYRRSSQSRLLCFVVTAIAKLATHHRELIPRARVSLGKVARSRISDARVWRRACDFLGLMKDPAICSSILGPSRPTQGTAQKVGSINWSEGSTKMIAHIPFYILGEQEGPPFHDFSFSDIIPKR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01118 459 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 5 456 - -
Viun11g01118 459 Pfam AP-5 complex subunit, vesicle trafficking 7 45 IPR028222 GO:0044599
Viun11g01118 459 SUPERFAMILY ARM repeat 10 319 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01118 Viun-Chr11 24278146 24289024 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01118 K19025 - gmx:100796067 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01118 11 24278146 24289024 Viun11g01118 11 24278146 24289024 ECH