Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01042 ATGGAGTCAATCATGGCAAAAGCTTTGGAGTACACTCTAAAGTATTGGCTCAAATCGTTCTCCCGAGACCAGTTCAAGTTGCAGGGTCGCACTGCTCAGCTTTCAAATCTAGAGTTGGATGGGGAGGCGTTGCATTCCAGCCTTGGATTTCCACCCATGCTCAGTGTCACCACCGCCAAAGTTGGCAAATTGGAGATTATGTTGCCGTCCGTAAGCAATGTACAAACAGAGCCTATCATCTTTCAAGTTGATAGGCTAAATTTGGCTCTCGAAGAGAATTCTGATTTTCAGCCATCTGAAAATCCAACAAGTAACACCACATCAAGTTCGTCCTCGAAGGGTAGCGGCTATGGTTTTTCTGATAAGATTGCAGATGGAATGACTATACAGATTCGTACGGTTAATCTATTAATTGAAACTCGTGGAAGTGCTTGTTGCCAAGGGGAACCAACTCGGGCACCACCTGTGGCATCTATTACCATGCACAACTTTGTACTGTATACGACAAATGAAAGCTGGGAGAAACTAGAATGGGAATCTATGTCTTTTGATCTTTTGCCTCATCCTGACATGTTCACGGATCCTACTTTAGGCCGCTCTCAAGAGGGATCAAACCCGAGAGATGAGGATGGTGAAAAGCGAGTATTATTTGGAGCAGAGCGTCTTATAGAAGGAATATCGGGAGAAGCATTTATCACGGTTCAGAGAACTGAATTGAACAGTCCATTTGCACTTGAGGTTCAGTTCCATGTTACTGAAGCTGTTTGTCCAGCATTAAGTGAACCAGGACTGCGTGCATTTCTTCGCTTTAAAACTGGATTACATGTCTGTCTAAGCAGGGGAAATGTAGATTTGAAGGCTAAGAAGCGGTCAACTGAAGCTGCTAGGAATTCCATTGTGTCAATTGTTGTGGACCATATATTTCTTTGCATTAAAGACTCTGACTTCCAACTTGAGCTTTTAATGCAGTCCCTCCATTATTCTCGGGCCAGTCAATCTGAAGGAGATAGTCATAGTAGCTTGACCAGAATTATAGTTGGAGGAGTATTTTTAAGGGACACCATTTCATTTCCTCCATGTACCTTAGTGCAACCATCAACGCAATCGGTCATAGGGGATGCTTTCCAAGTACCAACATTTGCAAGAAGCTTTTGCCCTTCAATATACCCACTAGGAGAACAGCAATGGCAATCAATTGTGGGAACTCCTCTAATATGCCTCCATTCTGTTCAGATCGTGCCTGCTCTTCCACCATCTTTTGCTTGTCAAACTGTTATTGATTGTCAACCTCTAATGATTCACCTCCAGGAAGAAACCTGCCTCAAGATATCATCATTCTTAGCTGATAGTATTGTTGTGAATCATGGTGACATTTTACCAGATTTCTCAGTAAAATCTTTTAATTTCACTCTCAAGGGTCTGGATCTTACAGTTCCTTTGGATAAGATCTGTCTGGATATTTCTAAAACCAATATAAACAATACAGTCAATACCTCTTTTGCTGGAGCAAGGCTTCGGATTGAAAATCTTTTCTTTTTAGATTCACCCTCATTGATACTGAAAATATTGAACCTCGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAGGGTCAACCAATTGATGCCAGTCAGAAGAAGTGGACTGCTGGAGCTTTCCAGGTTACTTTATCTCTTGAAGTATGTACAGACAAGCCTCCACATCAGAGCTCTCTCGGATGGACATCTGGATTGTGGAGATGTGTTGACCTGAAAGATGCTCGTATAGAAGTAGCTATGGTAACTGCTGATGGTAATCCATTGTTAAAGGTTCCTCCTCCAGGGGGTATCGTGAGGCTTGGTATAGCTTGTGAACAGTATCTATCCAACACTTCACTTGAACAATTATATTTTGTCCTCAGTGTCTATGATTATTTTAGGAGTGTTAGTGAGAAAATAGCCATAGCTGGAAAAAAGGGACAATTGAAGGATGTCAGGAACAAATATTTAAGTGGAAATCTGATGGAGAAGATTCCCAGTGACACTTCTGTAAGTTTGACAATAAAAAATCTCCAACTTCAGTTTCTTGAGTCATCTTCTGTGAATTCTAAGGGAATGCCTCTAGTACAGTTTGTTGGAGATGATTTTTTTGTTAGTGCTACTCATAGAACCCTTGGTGGTGCTATTGCTGTTTCATCCACATTAAATTGGGAGAGAGTTCAGATAGATTGCCTGGATTCTGAAGAGCATTTCACATGTGAAAATGACTCACCTTGTAGTACTAGCGAAAATCTTCCGTCAATAAGTGATCATGAACACCTTAAACTGAGACCTGTTTTCTGGGTGCATAACAAAAAACGGCTACTTAATGGAAATGCTCATTCATACCCCTTTCTGGACATACATATGGAGCAAGTCATACCATTTTGTGTAGTAGACACGGAAGTACATACTTTAAATCTCTCAGCTTCTATATCTGGTGTTCGTCTTGGTGGGGGAATGAATTACTCTGAGGCCCTCCTGCATCGATTTGGAGTACTAGGGCCTGATGGTGGTCCAGGGAATGGTTTGTCTAAAGGGTGGGAAAACTTACAAACTGGACCATTGGCAAAACTTTTTAAGACAACATCTCCGATTGATGATAATTTAGAAAATGTTGAAACTACGACAGAAGGGAAAGGTACCAGTTTTTCACACTTGAAGAAGCCAGATACCGTGGATATAACTATACAGTTGAGAGACTGGTTATTTGCTCTTGAAGGTGAGCATGACATGGCTGAAAGATGGTGGTTCTCAACCTATGATGCAAACAGAGAAGAGAGGTGTTGGCACACAACATTCCATATCTTGCGGGTAAATGCAAAAAGTTGCCCAAAGCGTGCTCTGGAAAGAAAAACACAATCACACAGAATACAACTATATCCTGTGGACGTGGTTACGGTTGGAGTTCAAGGGTTGAAAATCATGAAGCCTCAAGCCCAAAAGGACATTCCTTCATCAGTTATAACCGAAAATGGAGTAAAACAATTCACTGAAGAAGTTGAGGGAATTGATCTTGAAGTTGGCATGATATTACGTGAGGATAATGAAGATGATGAAATTTTTAATTGGGAAATGGAGAATCTAAAGTTTTATATAAGACAAACGAATGAAGCAATTGTAACCAAGGAAGACGTCCAAAACCTCACTTTTCTATGCAAATCCGAAATTGATTCTGTGGGCCGAATAATATCTGGAGTTTTACGGATATTTAAGCTTGAAAGTTCTGTCGGCCAGTATGTAATTGACAGGCTTGGCAACCTAGGAAGTAAAGACATTGTCAAGAATTTTTGTCCTGAGAAGCCTAGCATAGATGGTAGTGTTTCTAGCCAACAAAACCTAACAAAAGAAAGTCCAAGAAAAACTATGGAACAAACATTAACTTCGCTTGAGGAAGCAGTTGCTGGTTCACAGACTAAGATTAGTGATTTGATATCTGACATTGGTACTTCTGAATCTTCCTTTCAGCACCTTACTGTTATCAAAGAACTCGGTCAAAAGATTGAGTCGATGCAGGGTTTAGTGGTGCAATTGAAGAACCAACTTTAA 3564 0.408 MESIMAKALEYTLKYWLKSFSRDQFKLQGRTAQLSNLELDGEALHSSLGFPPMLSVTTAKVGKLEIMLPSVSNVQTEPIIFQVDRLNLALEENSDFQPSENPTSNTTSSSSSKGSGYGFSDKIADGMTIQIRTVNLLIETRGSACCQGEPTRAPPVASITMHNFVLYTTNESWEKLEWESMSFDLLPHPDMFTDPTLGRSQEGSNPRDEDGEKRVLFGAERLIEGISGEAFITVQRTELNSPFALEVQFHVTEAVCPALSEPGLRAFLRFKTGLHVCLSRGNVDLKAKKRSTEAARNSIVSIVVDHIFLCIKDSDFQLELLMQSLHYSRASQSEGDSHSSLTRIIVGGVFLRDTISFPPCTLVQPSTQSVIGDAFQVPTFARSFCPSIYPLGEQQWQSIVGTPLICLHSVQIVPALPPSFACQTVIDCQPLMIHLQEETCLKISSFLADSIVVNHGDILPDFSVKSFNFTLKGLDLTVPLDKICLDISKTNINNTVNTSFAGARLRIENLFFLDSPSLILKILNLEKDPACFCLWEGQPIDASQKKWTAGAFQVTLSLEVCTDKPPHQSSLGWTSGLWRCVDLKDARIEVAMVTADGNPLLKVPPPGGIVRLGIACEQYLSNTSLEQLYFVLSVYDYFRSVSEKIAIAGKKGQLKDVRNKYLSGNLMEKIPSDTSVSLTIKNLQLQFLESSSVNSKGMPLVQFVGDDFFVSATHRTLGGAIAVSSTLNWERVQIDCLDSEEHFTCENDSPCSTSENLPSISDHEHLKLRPVFWVHNKKRLLNGNAHSYPFLDIHMEQVIPFCVVDTEVHTLNLSASISGVRLGGGMNYSEALLHRFGVLGPDGGPGNGLSKGWENLQTGPLAKLFKTTSPIDDNLENVETTTEGKGTSFSHLKKPDTVDITIQLRDWLFALEGEHDMAERWWFSTYDANREERCWHTTFHILRVNAKSCPKRALERKTQSHRIQLYPVDVVTVGVQGLKIMKPQAQKDIPSSVITENGVKQFTEEVEGIDLEVGMILREDNEDDEIFNWEMENLKFYIRQTNEAIVTKEDVQNLTFLCKSEIDSVGRIISGVLRIFKLESSVGQYVIDRLGNLGSKDIVKNFCPEKPSIDGSVSSQQNLTKESPRKTMEQTLTSLEEAVAGSQTKISDLISDIGTSESSFQHLTVIKELGQKIESMQGLVVQLKNQL 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01042 1187 MobiDBLite consensus disorder prediction 94 115 - -
Viun11g01042 1187 PANTHER UNCHARACTERIZED 1 1185 IPR026728 -
Viun11g01042 1187 Coils Coil 1166 1187 - -
Viun11g01042 1187 Pfam N-terminal region of Chorein or VPS13 1 104 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01042 Viun-Chr11 22528652 22568030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01042 - - gmx:100782617 1613.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01042 11 22528652 22568030 Viun11g01042 11 22528652 22568030 ECH