Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01021 ATGTCCAAAGTATCATCATCATCATCACTCCCTGTTTTCTCCCAGGATGCCAAACCCAACTCAAACATCACTCGACACACTGCAACTTTTCATCCTTCCATTTGGGGGGATTATTTCCTTTCCTATGATTCTAGTTTTCAAGAAGACGATAGCGACATCAAACAAGTTTCACTCTTAAAAGATTATGTGAGGAAGATGATTGTGTCTCCTATTGATGACAATTTCCTTTCTAAATTGAACTTCATCAACTCAGTCCAACGATTAGGCGTTTCTTATCATTTTGAACATGAAATTGATGAGGCATTGCATCAAATGTATGAAATTTCGACAAAGGAGAATAATATAATAAATTATGATGATGATCTTCATCATCTCGCTTTGTTCTTCCGGTTGCTTAGACAACAAGGATATCCTATTTCATCGGATATATTTTACCATTTGAAGGACCACAAAGCAGGAAAGTTTAAGGAAAGCATTGTGAATGATGTACAAGGAATGTTGAGCTTGTATGAAGCATCCCAATTAAGATTCCATGGGGAAGACATACTGGAAGAGGCATATAGTTTTACTCTTAGTGAGTTAACTAAGTCATTAACTACCAAACTAAGCCCCTTTCTTTCTGGGTTAGTGGACCACAGCATAGGACAAGCACTTCGCAAGGGAATGCCTAGGTTGGAGGCGAGATATTATATATCTTTCTACCAACAAGATCCATCACATAATCAATGTTTGTTAACCTTTGCAAAACTAGATTTTAATATGTTGCAGAAGCTCCATCAAAAAGAAGTCAGCGACGTGACAAAGTGGTGGGTTAAAGATTTAAATGTCTCGACCAATTTTCCTTTTGTACGAGATAGGATTGTTGAAGGTTACTTTTGGATTGTTGGAGTTTATTATGAGCCGCAATATTGTCTTGCTAGAAGAATACTGAGGAAAGTAATAGCCATATCATCCATCATTGATGATATGTACGATGCCTATGGAACCATCGATGAGCTAGAGATTTTCACAAATGCAGTAGACAGGTGGGATATCTCTTTGTTAATTGATCTCCCAGAGTATATGAAATTATGTTATAAGGCACTTTTGGATATTTTTGAAGAAACAGAGCAAGAGCTGAGAAAACGAGGAAAAGAAAACTTCGTCAACTATGCAAAAAAAGAAATGAAAAGACTAGTCCAGGCATACCTTATTGAGTCAAGGTGGTTTCATTCCAACCACACACCAACTGTAGAGGAGTACATGGAGATTGCAACTAGGTCATGTGGTTATGCTATGTTGACAACTGTATCTTTCTTGGGCATGGAAGAAACAACAGAGGAGATCCTCGTATGGGCAACGAGTCACCCAAAAATTATTGAAGCTGCTTCCATTATTTGTAGACTCATGGATGACATTGTTGGAAGTGAGTTTGAACATGAAAGAGGACACGTTGTCTCAAGCCTTGATTGCTATATGAAGCAATATAATAGCTCAAGGCAAGATGCAATTAAAGAACTGCTTAAGTTGGTGGAGAGCGCTTGGAAGGACATTAATGAAGAATGCCTTAATCCAACTCAAGTACCAATGGAGTTTCTAATGCGTGTTGTCAACCTTACAAGAATGATGGACGTACTTTACAAAGAACAAGATAATTATACACATCCAGGAGGAATAATGAAGGATTATATCAAAGTTTTACTAATTAATAAGGTGTCCACAGAAATAAGCTAA 1713 0.3736 MSKVSSSSSLPVFSQDAKPNSNITRHTATFHPSIWGDYFLSYDSSFQEDDSDIKQVSLLKDYVRKMIVSPIDDNFLSKLNFINSVQRLGVSYHFEHEIDEALHQMYEISTKENNIINYDDDLHHLALFFRLLRQQGYPISSDIFYHLKDHKAGKFKESIVNDVQGMLSLYEASQLRFHGEDILEEAYSFTLSELTKSLTTKLSPFLSGLVDHSIGQALRKGMPRLEARYYISFYQQDPSHNQCLLTFAKLDFNMLQKLHQKEVSDVTKWWVKDLNVSTNFPFVRDRIVEGYFWIVGVYYEPQYCLARRILRKVIAISSIIDDMYDAYGTIDELEIFTNAVDRWDISLLIDLPEYMKLCYKALLDIFEETEQELRKRGKENFVNYAKKEMKRLVQAYLIESRWFHSNHTPTVEEYMEIATRSCGYAMLTTVSFLGMEETTEEILVWATSHPKIIEAASIICRLMDDIVGSEFEHERGHVVSSLDCYMKQYNSSRQDAIKELLKLVESAWKDINEECLNPTQVPMEFLMRVVNLTRMMDVLYKEQDNYTHPGGIMKDYIKVLLINKVSTEIS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01021 570 Gene3D - 73 240 IPR036965 GO:0010333|GO:0016829
Viun11g01021 570 FunFam Isoprene synthase, chloroplastic 203 555 - -
Viun11g01021 570 Gene3D Farnesyl Diphosphate Synthase 32 555 IPR008949 -
Viun11g01021 570 PANTHER OS04G0344100 PROTEIN-RELATED 24 548 - -
Viun11g01021 570 Pfam Terpene synthase family, metal binding domain 245 510 IPR005630 GO:0000287|GO:0010333|GO:0016829
Viun11g01021 570 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 240 IPR008930 -
Viun11g01021 570 SFLD Isoprenoid Synthase Type I 240 565 - -
Viun11g01021 570 FunFam Isoprene synthase, chloroplastic 73 240 - -
Viun11g01021 570 Pfam Terpene synthase, N-terminal domain 34 212 IPR001906 GO:0010333|GO:0016829
Viun11g01021 570 SFLD Terpene Cyclase Like 1 C Terminal Domain 240 565 IPR034741 -
Viun11g01021 570 SUPERFAMILY Terpenoid synthases 240 565 IPR008949 -
Viun11g01021 570 CDD Terpene_cyclase_plant_C1 25 563 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01021 Viun-Chr11 21399661 21404646 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01021 K15803 - gmx:100801358 878.241