Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02874 ATGACGGGGGATGAAGGCCCAAGCTACACAGTAGATGATGCTCTAGTGGCTGTGGGTTTTGGAAATTTCCAAATTCTGGTGCTTGTTTATGCTGGTGTTGGTTGGGTTTCAGAAGCAATGGAAATGATGCTACTCTCTTTTGTAGGCCCTGCAGTTCAAGCTGCATGGAGTCTTTCCGCTCACGAAGAGAGTTTGATAACCAGTGTGGTTTTTGTAGGCATGCTAATCGGAGCATACTCATGGGGCGTTGTTTCTGATAGATATGGAAGGAGGCAGATTGTGATGCCAAATCTGGGTTGGAGATGGCTTCTTGCGCTGTCTTCTCTTCCCACCTCTTTCCTTCTTCTGTTCTACAAAGTGACTCCTGAATCACCAAGATACCTATGCTTGAAAGGAAGAAAAGCTGAGGCAATTGAAGTTTTGGAAAAAATAGCAAGAGTAAATGGAAGAGAACTTCCTTCCGGTAACCTTGTCTCTGACCACGAAATTGAGCTACAGCAAATTGATAACCCTTCAGAGGACGCACGCTTGCTCTCTCCGAGAACAAATGAAATTAAACATCCTTCAGGAATGGATTCAAATTTAGGTGGTATCTCATCATTGTCGGTGCTTCTCTCACCAAAGTTGGCAAGGTCAACAGTTCTATTATGGGCTGTGTTCTTTGGTAATGCCTTTTCGTATTATGGCCTTGTTTTGTTGACAACTGAGCTGAACGGACATAGTAAATGCATGTCACATAAATTGCAGACAGAGAAGTCCCAGGATGTTGGATACAAGAGTGTTTTTATTGCCAGTTTTGCAGAGATACCTGGACTCCTCTTGTCAGCTGTGGCAGTCGACAAACTCGGTCGTAAACTATCAATGTCAACCATGTTCTTCATGTGCTGTATTTTTCTTCTTCCGTTGGTATTCCATCTGCCTGAAGGCTTAACAACGGGCCTTTTATTTCTCGCTCGCATTTGCATCACAGCGACCTTCACAATTGTGTATATATATGCACCAGAGATGTACCCAACATCAGTCAGAACAACTGGTGTGGGAATTGCAAGTTCGGTGGGCAGAATTGGTGGAATGATATGTCCTCTGGTTGCTGTGGGTTTAGTACATGAATGTCATCAAACTGCGGCTATCCTTCTGTTTGAGATCATAATACTTTTTTCAGGAATATGTGTCATGTTTTTACCGATTGAGACCATGGGCCAGGAACTGAGAGATAGTGTGCAAGTCTAA 1230 0.435 MTGDEGPSYTVDDALVAVGFGNFQILVLVYAGVGWVSEAMEMMLLSFVGPAVQAAWSLSAHEESLITSVVFVGMLIGAYSWGVVSDRYGRRQIVMPNLGWRWLLALSSLPTSFLLLFYKVTPESPRYLCLKGRKAEAIEVLEKIARVNGRELPSGNLVSDHEIELQQIDNPSEDARLLSPRTNEIKHPSGMDSNLGGISSLSVLLSPKLARSTVLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVGYKSVFIASFAEIPGLLLSAVAVDKLGRKLSMSTMFFMCCIFLLPLVFHLPEGLTTGLLFLARICITATFTIVYIYAPEMYPTSVRTTGVGIASSVGRIGGMICPLVAVGLVHECHQTAAILLFEIIILFSGICVMFLPIETMGQELRDSVQV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02874 409 Gene3D MFS general substrate transporter like domains 22 95 IPR036259 -
Viun10g02874 409 SUPERFAMILY MFS general substrate transporter 12 404 IPR036259 -
Viun10g02874 409 Gene3D MFS general substrate transporter like domains 96 409 IPR036259 -
Viun10g02874 409 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 399 IPR020846 GO:0022857
Viun10g02874 409 Pfam Sugar (and other) transporter 98 404 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun10g02874 409 PANTHER SYNAPTIC VESICLE GLYCOPROTEIN 2 8 95 - -
Viun10g02874 409 ProSitePatterns Sugar transport proteins signature 1. 275 290 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02874 Viun-Chr10 41216976 41221432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02874 123 407 Organic Solute Cotransporters AT3G20660 26.027 8.61e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02874 - - gmx:100786568 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02874 10 41216976 41221432 Viun10g02874 10 41216976 41221432 ECH