Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02865 ATGGCGGCAATCCAACCACCACAGGCTCCGGATCGTAAAGCCGAAGAGATACCAGCCGAACCAGATAACATGAAGGAGCAGTCTTCTCAGGGTACTGTGACTATAGGTCATTCGAGGGAGACCACAAGCCAATCAGGATCTTTAGGTTCGGGTGGAGATGTTCCTCTGTATCCTCCTAATGTGTATGCTCCCCAAGCCCAGGCTTTCTACTATAGAGGTTTTGACAATGGCAACGGTGAATGGGATGAATATTCTTCATATGTCAATTCTGAGGGATTAGAAATTGGATCTCCTGGTGTCTACAATGAAAATCCATCCCTTATTTTCCATTCTGGGTATGGCTTCAACCCACAAATGCCTTATGGACCGTATTCCCCAGTTACCACACCTTTGCCTTCTGTAGGCGGAGACACACAGTTATACTCCTCACAGCAATTTCCATACACTGGACCACCTTATTATCCTCAGCTAATTCCTCCTAGCTTATCATATCTCAATTCGCCTACTCCAGTTTCACAGCCAGAGCTCACCAACCTGGTAGGTATTGACCAACAAGTTGATAACATGTTTTTTGGACCAAGAGCAGGCTATCCATCAGTGGGATCTTTTGGTCGAGGCAGCTTTCCTGTAGCACCTGGTTCCTTTGGCTTTCATGAATCCCAACAAGGATTTGAAGGATCAAGATCTGGTGGTATCTGGTCAGATTGCTCAAAACCCTCAGAAAGACAAAGATCTTTAATGCCTCTATCGCCATCTGTTTCTCCACGGCCCATGGGCTCACTTGGGTCATTTGGGCCGAGTGTTGGAATGGCCTCTCATCAACAGCAATCATTGTATGGGTTTGGATCTGGCTCAAACTCTTATGGTAGAGGTTACCTGCCTAACCAGGGCTCTAGCTTTGGAGGTACTTCTATTTCCAATCTTAATGATAGGAGTTGTGCTTCTCTTGAAAATAGCAGGAGGCAAGGGCGGCCATCTGCATCTCTTTGCAATTGTAATGGTACTCTTGATATCCTTAGTGAGCAGAATCGAGGTCCAAGGGCCTCAAAGCTGAAAAATCAAATTTTGGCTGAAAAAAATTCTGTGGATAATAGTAAAAATAGTGCATCTACTGCCAAGTTTCAAAATGAATCACTCAATCGATCAGATTTTTCCATAGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTCCATAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAACGGAAACAGGAAGTTAGATTCTGCATATCGCCAAGCAATGGAGAAGCAAGAGGCCTGCCCTATATTTCTCTTTTTCTCGGTCAATGCTAGTGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGACAAGAGTGTGGACTTCTGGCAACAAGATAAGTGGAGTGGACAGTTTCCGGTGAAGTGGCACATAATTAAAGACGTTCCAAACAGTCAGTTTCGTCACATTGTTCTTGAAAATAATGATAACAAGCCTGTGACTAACAGTCGAGATACTCAGGAGGTGAAGTTGCCACAGGGTATTGAAATGCTGGCCATTTTCAAAAACTATGAAACTGATGTTTCCATCCTGGATGATTTTGATTTCTACGAAGACCGGCAGAAGGCTATGCAAGAACGGAAGGCAAGGCAGCAAAGCAGCATGATGACAACTGGGTTAGTTGGAGAAAATGAACATCGGAATTCTGCTAACACAACTGGTGAATTTATGAAGCAGATGTCAAAGAGCTTTGCTCTAGTTGTCCGCTTAGATGAGAATAACAACGAAGTTGCCGCGGACAGAGATAATTTAGTCTCTCATGGCCCCATTGGGAACGTAGTTAAATCTGATGATGGTCAATCAGTGACGGCCTCTTCAACTCAAACCAGTTAG 1914 0.4383 MAAIQPPQAPDRKAEEIPAEPDNMKEQSSQGTVTIGHSRETTSQSGSLGSGGDVPLYPPNVYAPQAQAFYYRGFDNGNGEWDEYSSYVNSEGLEIGSPGVYNENPSLIFHSGYGFNPQMPYGPYSPVTTPLPSVGGDTQLYSSQQFPYTGPPYYPQLIPPSLSYLNSPTPVSQPELTNLVGIDQQVDNMFFGPRAGYPSVGSFGRGSFPVAPGSFGFHESQQGFEGSRSGGIWSDCSKPSERQRSLMPLSPSVSPRPMGSLGSFGPSVGMASHQQQSLYGFGSGSNSYGRGYLPNQGSSFGGTSISNLNDRSCASLENSRRQGRPSASLCNCNGTLDILSEQNRGPRASKLKNQILAEKNSVDNSKNSASTAKFQNESLNRSDFSIDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDSAYRQAMEKQEACPIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLPQGIEMLAIFKNYETDVSILDDFDFYEDRQKAMQERKARQQSSMMTTGLVGENEHRNSANTTGEFMKQMSKSFALVVRLDENNNEVAADRDNLVSHGPIGNVVKSDDGQSVTASSTQTS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02865 637 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 80 604 IPR045168 -
Viun10g02865 637 MobiDBLite consensus disorder prediction 1 53 - -
Viun10g02865 637 MobiDBLite consensus disorder prediction 219 269 - -
Viun10g02865 637 MobiDBLite consensus disorder prediction 606 637 - -
Viun10g02865 637 FunFam YTH domain family 1, isoform CRA_a 370 543 - -
Viun10g02865 637 MobiDBLite consensus disorder prediction 220 250 - -
Viun10g02865 637 Pfam YT521-B-like domain 391 529 IPR007275 GO:0003723
Viun10g02865 637 Gene3D ph1033 like domains 367 543 - -
Viun10g02865 637 CDD YTH 392 528 IPR007275 GO:0003723
Viun10g02865 637 ProSiteProfiles YTH domain profile. 391 528 IPR007275 GO:0003723
Viun10g02865 637 MobiDBLite consensus disorder prediction 23 50 - -
Viun10g02865 637 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02865 Viun-Chr10 41206817 41215724 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02865 K20102 - gmx:100816860 1198.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02865 10 41206817 41215724 Viun10g02865 10 41206817 41215724 ECH