Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02862 ATGTGGAGGCTGAAGGTGGGAGATGGTGGAAAGGATCCTTACATATTCAGCACAAACAATTTCGTAGGGAGACAGATATGGGAGTACGATCCAGAGGCAGGTAGCATCGAGGAACGAGCCGAAGTGGAAGCAGCCAGGAACAATTTCTACCAAAACCGCTTCAAGATCAAGCCCTGTGGTGACCTTCTTTGGCGCTTTCAGGTTCTGAGAGAGAATAACTTCGAACAAAGAATTCCGAGTGTGAAGATAGAAGATGGAGAAGAAATAAGTTACGAGAAAGTGACGGCAGCGGTTAAAAGAGGCGCATATCATCTATCTGCATTGCAGACCAGTGATGGCCATTGGCCTGCGCAGATTGCAGGTCCTCTGTTTTTTCTTCCTCCTCTCGTATTCTGTATGTATATTACAGGTCATCTCGAATCAGTATTTCCAGAAGAGTATCGCAAAGAAATTCTCCGCTATATATACTATCACCAGAATGAAGATGGAGGATGGGGACTACACATTGAGGGTCACAGCACCATGTTTTGCACTGCACTAAATTATATATGTATGCGGATTCTTGGAGAAGGACCCAATGGAGGTCATGACAATGCTTGTGCTAGAGCAAGAAAGTGGATTCAAGATCATGGAAGTGTAACTCACATTCCTTCATGGGGAAAAACTTGGCTTTCGATACTTGGTGTATTTGATTGGTGTGGAAGTAACCCAATGCCCCCAGAGTTTTGGATCCTTCCTTCCTTTCTTCCTATGCATCCCGCTAAGATGTGGTGTTACTGTCGATTGGTGTACATGCCTATGTCTTACTTGTATGGAAAGAGGTTTGTTGGTCCAATTACACCTCTCATTTTACAATTGAGAGAAGAACTATTTGCCGAACCCTACGAAAAAGTTAATTGGAAGAAAGCGCGTCACCAATGTGCAAAGGAAGATCTGTACTATCCTCATCCTTTGATACAAGATCTAATATGGGACAGTTTATACATATTTACGGAGCCATTACTAACTCGTTGGCCTTTCAACAAGCTGGTTAGAGAGAAAGCTCTTCAAGTGACAATGAAACATATTCATTACGAAGATGAAACCAGTCGATACATTACCATTGGTTGCGTCGAAAAGGTTTTATGCATGCTTGCTTGTTGGGTGGAAGATCCAAATGGAGATGCTTTTAAAAAGCATCTTGCAAGGGTGCCAGATTACTTATGGATGTCTGAAGATGGAATGACCATGCAGAGTTTTGGTAGTCAAGAATGGGACGCTGGTTTTGCAGTTCAAGCTTTGCTTGCCACTAACCTAGTTGAGGAAATCGGTCCCACACTTGCAAAAGGGCATTATTTCATTAAGGAGTCTCAGGTAAGGGATAACCCTTATGGAGATTTTAAGGGTATGTATCGTCATATTTCTAAAGGATCTTGGACATTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGCACAGCGGAAGGTTTGAAGTGTTGTCTACTTCTATCAACGTTGCCACCAGAGATTGTGGGAGAAAAGATGGAACCCCAAAGGTTATATGATTCAGTCAATGTCCTGTTGTCACTTCAGAGTAAAAAGGGTGGTTTAGCAGCATGGGAGCCTGCGGGAGCTCAAGAGTGGTTAGAACTACTGAATCCGACGGAATTTTTTGCGGACATTGTGGTTGAACACGAATACGTTGAGTGCACCGGATCTGCAATTCAAGCTTTGGTTTTGTTCAAGAAGTTGTATCCAGGGCATAGGAAGAAAGAGATAGAGAATTTCATAAGCAACGCAGTTCGATTCCTCGAAAATACACAAACAGGCGATGGTTCATGGTACGGAAATTGGGGAGTTTGTTTCACCTATGGTTCTTGGTTCGCACTTGGTGGTCTTGCAGCTGCTGGCAAAACTTACACCAATTGCGCTGCTATTCGTAAAGCTGTTAAATTTTTACTCACAACACAGAGGGAAGACGGTGGATGGGGAGAGAGTTATCTTTCAAGCCCCAAAAAGATTTATGTACCACTAGAAGGAACTCGATCAAATGTTGTTCATACAGCATGGGCTCTCATGGGACTCATTCATGCTGGACAGGCAGACAGAGACCCTACTCCTCTTCATCGTGCTGCAAAGTTGCTCATCAATTCTCAGTTGGAAGAGGGTGATTGGCCCCAACAGGAAATCACTGGAGTGTTCATGAAAAATTGCATGTTGCATTATCCAATGTACAGAGATATTTATCCTATGTGGGCTCTAGCTGAATATCGTAGACGAGTTTCGTTGCCTTCCCGTGAAGTTTAA 2289 0.4329 MWRLKVGDGGKDPYIFSTNNFVGRQIWEYDPEAGSIEERAEVEAARNNFYQNRFKIKPCGDLLWRFQVLRENNFEQRIPSVKIEDGEEISYEKVTAAVKRGAYHLSALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEYRKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHDNACARARKWIQDHGSVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFAEPYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLVREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWMSEDGMTMQSFGSQEWDAGFAVQALLATNLVEEIGPTLAKGHYFIKESQVRDNPYGDFKGMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSTLPPEIVGEKMEPQRLYDSVNVLLSLQSKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFISNAVRFLENTQTGDGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGTRSNVVHTAWALMGLIHAGQADRDPTPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVSLPSREV 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02862 762 NCBIfam squalene/oxidosqualene cyclases 98 753 IPR018333 GO:0005811|GO:0016104|GO:0016866
Viun10g02862 762 FunFam Terpene cyclase/mutase family member 389 758 - -
Viun10g02862 762 CDD SQCY_1 98 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Viun10g02862 762 SFLD Prenyltransferase Like 2 84 755 IPR018333 GO:0005811|GO:0016104|GO:0016866
Viun10g02862 762 FunFam Uncharacterized protein 119 349 - -
Viun10g02862 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Viun10g02862 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 755 IPR008930 -
Viun10g02862 762 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Viun10g02862 762 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 756 IPR018333 GO:0005811|GO:0016104|GO:0016866
Viun10g02862 762 Gene3D - 73 226 - -
Viun10g02862 762 Gene3D - 389 759 - -
Viun10g02862 762 Pfam Squalene-hopene cyclase C-terminal domain 418 753 IPR032696 -
Viun10g02862 762 Pfam Squalene-hopene cyclase N-terminal domain 99 403 IPR032697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02862 Viun-Chr10 41179176 41186373 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02862 K15813 K20658 gmx:547702 1531.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02862 10 41179176 41186373 Viun10g02862 10 41179176 41186373 ECH