Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02854 ATGAAACTCTCAAGAAGCTTTTCGATATGCGCCCCAAAAATCATTAAGAAAATCCCAAACCATATCAAAAAATCATCCTTCTCCAGATCCTTAAGCTGTCATATTCAGCATCATTCCAAGAAGCCATTGCTAGGTTCCGGAGAGACCTCCGACGGCGCCGCCGCAAGGAACGCCAAGGTTCCCAAAGGCTTCATCGCCGTCTACGTGGGCCCCGACTTCCGACGCTTCATCATTCCGGTACGGTTCTTGGCCATGCCTGACTTCACCGCCTTGATGGAATCCGTCGCCGAAGAATATGGCTGCGATCATCACGGCGCCATTCACATCCCCTGCGACGAAGACTATTTTGAGCAAATTTTGACCTCCTGTTCCCACCGAAAACGGGCCCTCCTTCCTCCTAAGAAACTTTCCGACATCCCAATCATAAGTAGCCATTGA 438 0.5023 MKLSRSFSICAPKIIKKIPNHIKKSSFSRSLSCHIQHHSKKPLLGSGETSDGAAARNAKVPKGFIAVYVGPDFRRFIIPVRFLAMPDFTALMESVAEEYGCDHHGAIHIPCDEDYFEQILTSCSHRKRALLPPKKLSDIPIISSH 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02854 145 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 119 IPR003676 GO:0009733
Viun10g02854 145 Pfam Auxin responsive protein 41 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02854 Viun-Chr10 41149663 41150100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02854 60 120 Calmodulin-binding Proteins AT3G43120 55.738 6.48e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02854 K14488 - vun:114165672 295.819