Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02829 ATGGAGCGACCCATAAGCACTGTACAATTGGAGTGTGTGGCATTGTTCATATTGTGCACCACAGTCTTTGCTTCCGCTACTACTTCTCCACAGCAAGAATCACAATCACAATCTCGCCAACACAAAGGCGCGAGTTACCTGAAAATGGTGGTGAATGCGAGCGAGTTGCCACCGGAAGACTACTACGACTACATCATCGTGGGTGGCGGCACTGCGGGGTGCCCACTGGCGGCGACGCTGTCGCAGTCGTTTCGGGTGCTTGTGCTGGAAAGAGGAGGCGCCGGGAGCGAGAACCCCAACCTCATGAACCAAGAAGGGTTCTTGAGCAACCTCTTGAACGCCGAGACGGAGGACTCGCCGGCCCAGGCTTTCATTTCCGAAGAGGGAGTGCCCAACGCCCGTGGCCGTGTTCTTGGCGGCAGCAGTGCCATCAACGCGGGCTTCTACAGCCGAGCCCACCGGGATTTCTTCCTGAAGTCGGGCTTGCCCTGGGACCTCGCGCTGGTGAACCGCTCGTACCAGTGGGTGGAGAAGGAAATCGTGTTCAGACCCAACCTCAAGACGTGGCAATCCGCGGTTCGCGATGGGTTGCTCGAAGCAGGGGTCACTCCCTACAACGGTTTCACTCTGGACCACGCCAAGGGGACCAAGATCGGGGGCTCCACTTTCGACACCTCTGGCACAAGACACACCTCTGCGGATCTTCTCAGGCACGCTCGTTCATCCAACATCAAGGTCGCCGTTCACGCCACCGTGGAGAGGCTGCTTCTGGCGGGTTCCACCGCCATCGGAGCCCTGTACCGCGACCAGATGGGGGGCCACCACCACGCATTTTTGCGGGAACACGGCGAGGTGATTCTTTCCGCCGGTGCCATTGGAAGCCCTCAGCTTCTTCTTCTGAGCGGGATCGGTCCCAGACCCTATCTCTCTTCATGGGGTATCCCTGTGGCGCATCACCTACCCTACGTTGGCCACTTCCTCTACGATAATCCCAGAAACGGAATCACCATTCTCCCCTCCCTTCCACTCGACCATTCTCTCATCCAAGTCGTCGGAATCACCGACTCCGGCGCTTACATCGAGGCTGCATCCAACGTCATTCCTTTCACCTCCCCTCGCCACACCACTTTCGTCCGCTCCCCCCTCTACCTCACCGTGGCCACCATCATTTCCAAGATTTCCGGCCCTCTCTCCGCCGGCTTTCTCAGACTCGCTTCCACCGACGTCGACGCGAATCCCCGCGTGAGGTTCAACTACTTCATCAACCCCCTCGACCTTGAGCGCTGCGTCAACGGGACCAGGAAGATAGCCCAAATCCTCAGGAGCAGGGCCTTGAAGGACTTCAAATTCTCCAACTGGTTCGGGGAGCCGGACTTCAGGTTCATAGGCCCCGCATTGCCGCTTCATCAAACGGACTACACTCGCATGGCCGATTTCTGCCGCCGCACTGTGAGCACCATCTGGCACTACCACGGCGGCTGCGTGGTTGGCAGGGTGGTTGATCCCACTCTGAAGGTCATCGGAGTTGATTCCCTTCGTATTGTTGACGGTTCCGTCTTCAGCGTATCGCCCGGAACCAATCCTCAGGCCACCCTCATGATGCTCGGACGGTATTTTGGGTTGAAGATTATCAGAGAAAGGAACGCATCCTAA 1653 0.5796 MERPISTVQLECVALFILCTTVFASATTSPQQESQSQSRQHKGASYLKMVVNASELPPEDYYDYIIVGGGTAGCPLAATLSQSFRVLVLERGGAGSENPNLMNQEGFLSNLLNAETEDSPAQAFISEEGVPNARGRVLGGSSAINAGFYSRAHRDFFLKSGLPWDLALVNRSYQWVEKEIVFRPNLKTWQSAVRDGLLEAGVTPYNGFTLDHAKGTKIGGSTFDTSGTRHTSADLLRHARSSNIKVAVHATVERLLLAGSTAIGALYRDQMGGHHHAFLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITILPSLPLDHSLIQVVGITDSGAYIEAASNVIPFTSPRHTTFVRSPLYLTVATIISKISGPLSAGFLRLASTDVDANPRVRFNYFINPLDLERCVNGTRKIAQILRSRALKDFKFSNWFGEPDFRFIGPALPLHQTDYTRMADFCRRTVSTIWHYHGGCVVGRVVDPTLKVIGVDSLRIVDGSVFSVSPGTNPQATLMMLGRYFGLKIIRERNAS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02829 550 PIRSF Alcohol_oxidase 365 550 IPR012132 GO:0050660
Viun10g02829 550 PIRSF Alcohol_oxidase 37 365 IPR012132 GO:0050660
Viun10g02829 550 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Viun10g02829 550 Pfam GMC oxidoreductase 62 330 IPR000172 GO:0016614|GO:0050660
Viun10g02829 550 Gene3D - 62 536 IPR036188 -
Viun10g02829 550 Gene3D - 182 486 - -
Viun10g02829 550 PANTHER OSJNBA0019K04.7 PROTEIN 26 548 - -
Viun10g02829 550 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 493 - -
Viun10g02829 550 SUPERFAMILY FAD/NAD(P)-binding domain 48 546 IPR036188 -
Viun10g02829 550 Pfam GMC oxidoreductase 396 537 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02829 Viun-Chr10 41033305 41035503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02829 10 547 Miscellaneous Gene Families AT5G51950 44.881 1.46e-150 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02829 K08248 - gmx:100820069 910.598