Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02824 ATGGCTGCTGCTGCGACTGCTGGGGTTGTTGGTGGTAATGCTTCGTCTGCTTCCTGGATGCAATTCAAAGGCAAGGAAAGGAAGCATGCCAAAATCAACAGATCTAGGGTTTGTTGCTCCTATTATTCTTCTTCTTCTGTGATGGATCCTTACAAAACCTTGAGAATACAACGAGGTGCCTCTGAATCTGAAGTCAGAAAGGCTTTCCGACAACTCGCTCTGCAGTACCATCCAGATGTATGCAGAGGAAACAATTGCGGGGTGCAATTTCACGAAATCAACGAGGCTTATGATATTGTGATAGCTAGGTTGAGAGGAGAATCAAGTGCGACAGAAACTTACGAAAGTATATATGATAACGACAATGATGAGTCACTGAGAGGAATGAACGATCCAGATTGGGACATGTGGGAGGAGTGGATGGGGTGGGAAGGAGCAGGAATCCGTGACTACTCCTCTCATATTAATCCATACATATGA 480 0.45 MAAAATAGVVGGNASSASWMQFKGKERKHAKINRSRVCCSYYSSSSVMDPYKTLRIQRGASESEVRKAFRQLALQYHPDVCRGNNCGVQFHEINEAYDIVIARLRGESSATETYESIYDNDNDESLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02824 159 FunFam chaperone protein dnaJ 8, chloroplastic 20 110 - -
Viun10g02824 159 Gene3D DnaJ domain 19 107 IPR036869 -
Viun10g02824 159 Pfam DnaJ domain 49 100 IPR001623 -
Viun10g02824 159 CDD DnaJ 49 99 IPR001623 -
Viun10g02824 159 ProSiteProfiles dnaJ domain profile. 49 122 IPR001623 -
Viun10g02824 159 PRINTS DnaJ domain signature 69 84 IPR001623 -
Viun10g02824 159 PRINTS DnaJ domain signature 85 105 IPR001623 -
Viun10g02824 159 PRINTS DnaJ domain signature 51 69 IPR001623 -
Viun10g02824 159 PANTHER CO-CHAPERONE PROTEIN DJLA 35 157 - -
Viun10g02824 159 SMART dnaj_3 48 105 IPR001623 -
Viun10g02824 159 SUPERFAMILY Chaperone J-domain 44 143 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02824 Viun-Chr10 41006933 41008294 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02824 - - gmx:100780336 235.728