Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02813 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCGCGGTCGCCGACCCCGACGCGCGTCCAGTGCTTGTCCCGGCAGGCAACAAGGTCCGACCCGCCGTCGACGGACGGAAGCCGGTGAAGAAATTGACGCCGGAGACAGAAAAGAAGACGGTGGCGCTTTCAAATGCGCCACCGCAATGCATCTCCGCTCCTCCATCTTTTATTTTGCGGCGGCAGGAGCGTCACCAGGCCGTGCTGAAAAACCTGTCTTCGATGAACGCTTCGTACTCCTCTGACGCGTCGTCGACGGATTCCTCCACTCACAGTAGCGGCGCGTCGTCAAGTGGGAAGGTGGCTCGTCGGGTTAGTGTGCAGTTGAGGAAGAAGCAGTGTGGTCCCAAGATGGAGAAGGTGAGTAGTGACAATGTGGGTGGTTCTGATGATCTCGATTTGAGTGATAGCTTGGAGGGCAAGAAACGGTGTGCTTGGGTTACACCAAATACAGAGCCATGGTATGTTGCTTTTCATGACAACGAGTGGGGAGTTCCTGTTCATGATGACAGGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCTGAGCTTACGTGGCCTACTATTCTTAACAAAAGGCAGCTATTTCGGGAAGTCTTTTTGGATTTTGATCCTAGTGCTGTTTCTAGAATGAATGAGAAAAAGATAGCTGCACCAGGAAGTCCTGCCAACTCATTGTTATCAGAACTCAGGTTGCGATCAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATTGAAGAGTTTGGATCTTTTGACACATTTATTTGGAACTTTGTTAACCACAAGCCTATAGTGAGCCAGTTCAGGTACTCACGCCAGGTACCTGTGAAATCTCCAAAAGCTGAATTCATAAGTAAAGACCTTGTAAAGAGAGGTTTCAGAAGTGTTGGACCAACAGTTATCTACACATTCATGCAAGTGGCTGGTCTAACAAATGACCACCTTATCAGTTGCTTCAGATTCAAGGAGTGTACCTCCAATGCAGAAGCCATGGTCAACGAAAGCTCCCTCAACTCCAAGCTCAAAGAGAAGCCAAATGATGACACAACCGATGTGGGCCTGTTACTGGCTGTGAACAAAATGAATTTCTCTTCTAAGTAG 1143 0.4882 MSGPPRVRSMNVAVADPDARPVLVPAGNKVRPAVDGRKPVKKLTPETEKKTVALSNAPPQCISAPPSFILRRQERHQAVLKNLSSMNASYSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKMEKVSSDNVGGSDDLDLSDSLEGKKRCAWVTPNTEPWYVAFHDNEWGVPVHDDRKLFELLSFSGALAELTWPTILNKRQLFREVFLDFDPSAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNHKPIVSQFRYSRQVPVKSPKAEFISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAEAMVNESSLNSKLKEKPNDDTTDVGLLLAVNKMNFSSK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02813 380 Gene3D Hypothetical protein; domain 2 152 335 - -
Viun10g02813 380 MobiDBLite consensus disorder prediction 88 144 - -
Viun10g02813 380 Pfam Methyladenine glycosylase 161 334 IPR005019 GO:0006284|GO:0008725
Viun10g02813 380 PANTHER OS04G0501200 PROTEIN 6 344 - -
Viun10g02813 380 MobiDBLite consensus disorder prediction 88 114 - -
Viun10g02813 380 SUPERFAMILY DNA-glycosylase 153 338 IPR011257 GO:0003824|GO:0006281
Viun10g02813 380 MobiDBLite consensus disorder prediction 34 48 - -
Viun10g02813 380 MobiDBLite consensus disorder prediction 22 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02813 Viun-Chr10 40928398 40938793 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02813 K01246 - gmx:100805836 589.341