Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02801 ATGGAGGTTCCGAGTTCCTGGGATGCCCTTCGCAAGCAGGCGAGAAAACTTGAAGCTCAGTTGGATGAGCAGATGAATTCTTATCGTAAAATGGTTTCTGCTAATGCTTCTTCAAAAGCTGATGCCTCAGAGAGTGATCTAGAGTCTTGGATTGAGCGATTACTAAAACAACTCCAACAAGTAAATGCTCAGATGCAAGCTTGGGTGTCATCTGGTGGTTCAGAAATGGTTTCTCACACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCACCCAGGAATTTTATCGCCTTCGTTCAAGTCTTCTAGCTAAGCAAGAACATGCTTCACTGCTGGAAGATTTTAAAGAATTTGATCGGACAAGATTAGACTTGGAACAAGGTGTAGACACTGAACAGCATGCACTCCTTAAAGAGCGTGCATCTATCAGCCGAAATACAGGACATATGGACAATGTTATTTCACAAGCACAAGCAACACTAGGAGCACTTGTATTCCAACGTTCAACATTTGGTGGTATCAATTCAAAGCTTGGCAACGTTAGCAGTCGTCTCCCAACGGTAAATACCATACTTTCGGCAATAAAGAGGAAAAAGTCAATGGATACCATTATACTTTCCCTTGTTGCAGCCGTATGCACATTTCTGATTTTCATCTACTGGCTATCCAAGTGA 675 0.4193 MEVPSSWDALRKQARKLEAQLDEQMNSYRKMVSANASSKADASESDLESWIERLLKQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLLAKQEHASLLEDFKEFDRTRLDLEQGVDTEQHALLKERASISRNTGHMDNVISQAQATLGALVFQRSTFGGINSKLGNVSSRLPTVNTILSAIKRKKSMDTIILSLVAAVCTFLIFIYWLSK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02801 224 Pfam Snare region anchored in the vesicle membrane C-terminus 135 199 - -
Viun10g02801 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Viun10g02801 224 PANTHER GOS-28 SNARE- RELATED 4 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Viun10g02801 224 Coils Coil 7 27 - -
Viun10g02801 224 Coils Coil 51 71 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02801 K08495 - gmx:100797885 409.453