Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02791 ATGTCAGAGGAAGAATTACACTTACCTGATGAATGCTGGGAATCGGTATTCAAATTCCTCAAACCCATTCCTCACTTCGAACCTCTCTCTCTTGTCTCAACCCAATTCCTCTCCATCACGAACCTCCTCCGAACCTCGCTCACCATATCCAACCCTACGCTTCCCTTTCTCCCCAACCTCTTCCGAAGGTTCCCCTCCATCACCTCCCTTCACCTCACGCGCCTCCACCACTCCCACCTCCACACGCTCCTCCTCCAGCTCTCACGCGCCGCCCTACCACTCCAATCCCTCAACCTCTCCGGCCACCCCTCCCTCCCCTCAAATGGGTTGCGCGCGTTCGCCAGAAAGATCCCAACTTTGACATCCCTCACCTGCTCCCACATGGGTTGTCTCCGAAACGCCGATCTCCTTCTAATCGCCGATTGCTTCCCTTTCCTCGAACATCTCGACGTCAGTTTCCCCGAAAATAACGACAATTCAACCGACCCAGTTTCCGATTTCGGCGTAAAGGCTCTCTCTTTGGCCCTCCCCAACCTCCGTAGCGTTAACCTCTCCGGCAATTACTTCATCAACGACCCTTCCATTCTCAGCCTCTGCAAGAACTGCGAGCTTCTCGAGGAAATTGTAATCTTCGAGTGCCACTTCATCACGCAGCGTGGCATCGCTTCCGCGATTCGTGAAAGACCGTGTCTGCGTTCTTTCTGCGTTAGCAATTTCGGGTATGGAATAAAGAACGGTGACAATGCCAGACCCTATGTGACCTCCGATTTCATCACTGCGCTGGTGGGTTTGAAGGGCTTGACCTGTCTCGATTTGTCGTGTTCTTCTATCTCTGATGAGTTCCTATGCTGTGTCGCGGAGGAAAAAATTCCCTTGAAGAAGCTTGTTTTACAAGGTTGTTGCAACTACACTTACGTTGGAGTGTTGTGCTTGTTGTCCTCATGTCAGACAATGGAGCATTTGGATCTTCAAAACACCGAGTTTCTCTGTGATCGGCGTGTGGAAGTGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTTAGTGGATGTAGGACGTTAACTGATTTAGCTTTGTTTGCACTCATCAAGAACTGTCCTTTGTTGAATGAGATAAAAATGGAGGCAACGGATGTTGGGAAGAAGGGGATTGATGTTGAAGAGGAGTTGTTGGTGAATGGTGTTGTGAATCGTGGAGTTAAGTCTCTGTATTTGGGAAGAAATTCCTGGTTGAGGGATGAAAACGTTGAAATGATTGCTTCTGTTTGCCCCAGTTTGGAGGTGCTTGATTTGAGTTATTGCTGTGGAATATCTGAAGGTGTAGTTGAGGTTTTGAGGAGGTGTAGGGAGGTTAGGAATCTGAGCTTGGCGTTTTGTTCAGGAGTGAAGTTAAAAGGGATGGAATTTGAAGTTCCAAAGCTTGAGGAGTTGAACTTGTCACGATCAACAGTTGATGATGAAACGCTTTGTGTGATCTCAAAGTGTTGTCGTTGGTTGCTGCATTTGGACTTGGAAAATTGTTCTGGTGTGACAGGCAATGGAGTTAGGGAAGTGGTGGAGAAGTGCAGGAGATTGAGGGAGATTAATTTGGTGTCTTGTTGTGAAGTTGAAGCTAGTGTTGTTGCTTGGATGGTATTTTCAAGGCCATCATTGAGAAGGATAATGGCTCCTCCTAGTTTTGATCTTAGTGGTGGCCAGAGGGAACTTCTCTTGCGCCATGGCTGCATTGTTAGCTTGTAG 1743 0.4785 MSEEELHLPDECWESVFKFLKPIPHFEPLSLVSTQFLSITNLLRTSLTISNPTLPFLPNLFRRFPSITSLHLTRLHHSHLHTLLLQLSRAALPLQSLNLSGHPSLPSNGLRAFARKIPTLTSLTCSHMGCLRNADLLLIADCFPFLEHLDVSFPENNDNSTDPVSDFGVKALSLALPNLRSVNLSGNYFINDPSILSLCKNCELLEEIVIFECHFITQRGIASAIRERPCLRSFCVSNFGYGIKNGDNARPYVTSDFITALVGLKGLTCLDLSCSSISDEFLCCVAEEKIPLKKLVLQGCCNYTYVGVLCLLSSCQTMEHLDLQNTEFLCDRRVEVLCEFLGNLVSINVSGCRTLTDLALFALIKNCPLLNEIKMEATDVGKKGIDVEEELLVNGVVNRGVKSLYLGRNSWLRDENVEMIASVCPSLEVLDLSYCCGISEGVVEVLRRCREVRNLSLAFCSGVKLKGMEFEVPKLEELNLSRSTVDDETLCVISKCCRWLLHLDLENCSGVTGNGVREVVEKCRRLREINLVSCCEVEASVVAWMVFSRPSLRRIMAPPSFDLSGGQRELLLRHGCIVSL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02791 580 Gene3D Ribonuclease Inhibitor 4 379 IPR032675 -
Viun10g02791 580 PANTHER UNCHARACTERIZED 7 309 - -
Viun10g02791 580 SUPERFAMILY RNI-like 7 239 - -
Viun10g02791 580 Pfam Leucine Rich repeat 424 438 IPR001611 GO:0005515
Viun10g02791 580 SUPERFAMILY RNI-like 255 543 - -
Viun10g02791 580 SMART LRR_CC_2 472 496 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 91 116 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 341 366 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 424 448 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 176 201 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 202 227 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 289 314 IPR006553 -
Viun10g02791 580 SMART LRR_CC_2 497 522 IPR006553 -
Viun10g02791 580 Gene3D Ribonuclease Inhibitor 383 467 IPR032675 -
Viun10g02791 580 Gene3D Ribonuclease Inhibitor 468 556 IPR032675 -
Viun10g02791 580 FunFam F-box/LRR-repeat protein 20 470 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02791 Viun-Chr10 40794729 40796948 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02791 K10268 - gmx:100819538 879.782