Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02778 ATGGATTCAAATAATTGGAGACCTAATCAAGGTAATAATCCCACTATGGATACAAACGATTGGAGAGCTCAACTACCACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGACACATTAAAAAAACACCTTCCTCTTTCTGGTCATGACGGAATGAATGAACTACGGAAGATTGCTACAAGGTTTGAAGAAAAGATTTTTACTGCTGCAACAAGCCAGCCTGATTATCTACGGAAAATATCTATGAAGATGCTTACAATGGAGACTAAATCCCAAAACACCCTGGCTAACAATCAAGTTGGCACTAGCAATAAACCTACAGATCAAGGACTTGTTTTGCAGCCTCAAGTTCATAATCTTGGGCAACAACATTCTGTTCCTTTGCCTAGTCAGATGCAGTCACATCAGCAGCTTCTATCTCAAAATGTTCAAAATAATGTTGCATCGCAACCTAACCTTCCACCTGTATCTAGTCTAGCCCAGACTCCCAGCCAAAATATTGTCCAGAACTCTAACGTACAGAATATACCTGGGCCAAATTCAGTTGGAAGCACTATTAGCCAAAATTCCAACTTACAGAGTATGTTTCCTGGTTCTCAGAGAACAATGCCAGGAAGGCAGCAGGTTGGTCCCCCACAACAACAGCTGCAATCACAGAATCCACAGCAATTTCTTTACCACCAGCAGCAGTTACTGAAGCAGAAGCTCCAGCTTCATTCTCAGATACAGCAGCAGCAACAACAGCAAAGCCTTATGCAACCAAATCAGTTGCAATCTTCTCATCAATCTACTAGTGTTCAACAGTCAATGCAGTCAATGCCTCAGCAACATTCACAAGTTATGAGGCATCAACAACAGACTTCTATGGTACATCAACAACAAACACCAGTCACTCAACAGACAATCTTACCCTCACAACAGCAACAACTTATGGGACCTCAGTCAAATACAACAAACATGCAACATTCCCAAATGCTTGGGCAACAGAACAATGTTGGTGATATACAGAAATCTCAGAGGATGCTTTCACAACAAAGTAATCTTACAAGCCTGCAACAGCGACAACAGTTAATAAATCAGCAAAACAACCCAGCAAATGTACATCAACAACAATTGGGAAATAATGGCCCTGGGTTACAGCAGCAGCATTTGCTTGGACCTGACTCTGGCAATGCAGACATGCACACAAGTCATCACTCTGCACACATGCTGCAACAACCAAAGGTTCCAATGCAGCAACAATCACAACAAAATTCGTCAAATTTGTTGTTACCTCATTCACAGCAGTCACAGCCACTGGGTTCACAACAGCAATTAATGTCTCAGATTCACACTCAGCCCACACAGTTGCAACAGCAATTGGGCTTGCAGCAGCAGCAGCAGCCAAATCCCTCACAACGTGATATGCAGCAAAGAATTCAAACATCAGGATCCTTACTTCAACAACAAAATGTTCTTGATCATCAAAAACAGTTGTATCAATCTCAAAGAAATCTTTCAGAAACATCAGCAACTTCTCTGGACTCTACAACACAGTCTGCACAACCTAGTGGAAATGATTGGCAAGAAGAAGTTTACCAGAAGCTCCAAGCCATGAAAGAAAGTTATTTGCCAGATATGAATGAATTGTACCAAAAAATTGCTAATAAACTTCAGCAGCATGATTCTCTTCCCCAACAGTCCAAACCAGATCAGCTTGATAAGATGAGGGCATATAAAATGATGTTGGAGAATATGATGACATTCGTACAGATTCCCAAGATCAGCATTTTGCCTCACTACAAGGAGAAATTGGTACCATATGAGAAGCAGATTGTAGGTCTCCTAAATCAAAGTAGACCCAGGAAAGGACAGATTCCCCAAACCCATATGTCCTCCATGCAACAGCCCCAATCCCAAGTTACGCAATTACAGTCTCATGAAAATCAAATGAACTCTCAGCTGCAGTCAACAAATTTACAAGGTTCTGTGCCAACCATGCAGCAGAATAATATTGCAACCTCTCAGCACAATCCTTTGTCGGGTGTATCAGCAGGACAGCAGAATATGATGAATTCGATGCAACCTGGAACTAGTTTAGATTCTGGACAAGGAAATTCTGTGAACTCCCTTCAACATGTTCCAATGAACTCCATGCAACAAACTCCTGTCAGTACTCCTCAACTACAGACTAACATTAATTCCTTACAATCACAAGGTGGGGCAAATGTCAGTCAACCAAATTCCCTTCACTCAGGTTCCAGTGCACTTCAACACCAACTGAAACATCAGGAACAGCAGATGCTGCAGAATCAGCAATACAAACAATATCATCAGCAGCGAATGTTGCAGAGGCAGCTCCTTCAGCAGCAGCAACTACACCATCCAGCGAAGCCACAGCTATCTGCACAATTGCAAACACATCAAATGTCCCAGCTTCACCAAATGAATGATATAAATGACTTAAAAATGCGACAAGGAATTGGTGTTAAGCCAGGGGTCTTTCAACAACATCTTACATCAGGTCAACACTCAGCATATTCCCATCAACAGCTGAAACAAGGGAATGCATTTCCTGTTTCTTCACCCCAACACCTTCAGGCTCCATCTCCGCAGATTCAGCAACATTCATCTCCCCAGGTTGAGCAACAAAATCATCTCCCGTCTAAAACTAAAGTTGCAACTCCTCTGCAATCTTCTAATTCACCCTTTGTAGGACCTACCCCTTCACCTCCTTTGGCTCCATCTCCTATGCCAGGGGAATCTGAGAAGTCCATTCCCTGTGTTTCATCAATATCGAATGCCACAAATATTGGACATCAACAAACAGGGGGTGCAGTAGGACCACCTCAATCCCTTGCCATTGGGACTCCTGGGATTTCAGCGTCTCCTTTATTGGCAGAATTCAGTGGTCCGGATGGTGCGTATGGCAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCCTAATTAATGTGGTAAAATCAATGTCATCTAAAGCATTGAGTGCTGCTGTCAGTGATATTGGTTCAGTTGTCAGCATGAATGATAGAATAGCAGGATCAGCTCCAGGTAACGGATCCAGAGCAGCTGTTGGTGAAGATTTGGTTTCCATGACTAATTGTCGCCTTCAGGCTCGAAATTTCATTACCCAAGATGGTACCAATGGAATTAAGAGGATGAAACGTTACACAAGTGCTATACCCTTGAATGGTGTATTATCTGCTGGTAGCATGAATGATAGCATCAAGCAGTTAACTGCTTCGGAGGCTTCTGATCTAGAGTCAACAGCAACATCCAGTGTCAAGAAACGGAAAATCGAGGTTAACCATGCCCTTTTGGAAGAAATAAGGGAGATTAATCACCAACTTATCGACACAGTAGTAGACATAAGCAATGTTGATCCAACACCTGCTGTTGCCGCTGATGAAGGAGCAGAAGGAATCCTTGTCAAATGCTCTTTCATTGCTGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCAGCGCAGATGTCACCTATTCAACCCCTGCGTTTATTGGTCCCTGCAAATTATCCTAATTGTTCTCCCATACTCCTAGACAAATTTCCAGTTGAATCCAGTAAGGAGAATGAAGATCTTTCGGCGAAGGCAAAGGCAAAGTTTAGCATTTCTTTGCGCAGTTTATCACAACCTATGTCACTTGGGGATATAGCAAGGACTTGGGATGTTTGTGCTCGCAGTGTTATTTCTGAGCATGCCCAACAGAGTGGGGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGCTTGACCACAAACTAA 3819 0.4279 MDSNNWRPNQGNNPTMDTNDWRAQLPPDSRQRIVNKIMDTLKKHLPLSGHDGMNELRKIATRFEEKIFTAATSQPDYLRKISMKMLTMETKSQNTLANNQVGTSNKPTDQGLVLQPQVHNLGQQHSVPLPSQMQSHQQLLSQNVQNNVASQPNLPPVSSLAQTPSQNIVQNSNVQNIPGPNSVGSTISQNSNLQSMFPGSQRTMPGRQQVGPPQQQLQSQNPQQFLYHQQQLLKQKLQLHSQIQQQQQQQSLMQPNQLQSSHQSTSVQQSMQSMPQQHSQVMRHQQQTSMVHQQQTPVTQQTILPSQQQQLMGPQSNTTNMQHSQMLGQQNNVGDIQKSQRMLSQQSNLTSLQQRQQLINQQNNPANVHQQQLGNNGPGLQQQHLLGPDSGNADMHTSHHSAHMLQQPKVPMQQQSQQNSSNLLLPHSQQSQPLGSQQQLMSQIHTQPTQLQQQLGLQQQQQPNPSQRDMQQRIQTSGSLLQQQNVLDHQKQLYQSQRNLSETSATSLDSTTQSAQPSGNDWQEEVYQKLQAMKESYLPDMNELYQKIANKLQQHDSLPQQSKPDQLDKMRAYKMMLENMMTFVQIPKISILPHYKEKLVPYEKQIVGLLNQSRPRKGQIPQTHMSSMQQPQSQVTQLQSHENQMNSQLQSTNLQGSVPTMQQNNIATSQHNPLSGVSAGQQNMMNSMQPGTSLDSGQGNSVNSLQHVPMNSMQQTPVSTPQLQTNINSLQSQGGANVSQPNSLHSGSSALQHQLKHQEQQMLQNQQYKQYHQQRMLQRQLLQQQQLHHPAKPQLSAQLQTHQMSQLHQMNDINDLKMRQGIGVKPGVFQQHLTSGQHSAYSHQQLKQGNAFPVSSPQHLQAPSPQIQQHSSPQVEQQNHLPSKTKVATPLQSSNSPFVGPTPSPPLAPSPMPGESEKSIPCVSSISNATNIGHQQTGGAVGPPQSLAIGTPGISASPLLAEFSGPDGAYGNALAATSGKSTVTEQPLERLINVVKSMSSKALSAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTNGIKRMKRYTSAIPLNGVLSAGSMNDSIKQLTASEASDLESTATSSVKKRKIEVNHALLEEIREINHQLIDTVVDISNVDPTPAVAADEGAEGILVKCSFIAVALSPSLKSQYASAQMSPIQPLRLLVPANYPNCSPILLDKFPVESSKENEDLSAKAKAKFSISLRSLSQPMSLGDIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02778 1272 MobiDBLite consensus disorder prediction 171 220 - -
Viun10g02778 1272 FunFam Mediator of RNA polymerase II transcription subunit 15a 20 98 - -
Viun10g02778 1272 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 92 IPR036529 GO:0003712|GO:0006355
Viun10g02778 1272 MobiDBLite consensus disorder prediction 731 768 - -
Viun10g02778 1272 Pfam KIX domain 19 98 IPR036546 -
Viun10g02778 1272 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 837 1261 IPR044661 GO:0003713|GO:0031490
Viun10g02778 1272 MobiDBLite consensus disorder prediction 782 803 - -
Viun10g02778 1272 MobiDBLite consensus disorder prediction 851 898 - -
Viun10g02778 1272 MobiDBLite consensus disorder prediction 248 276 - -
Viun10g02778 1272 MobiDBLite consensus disorder prediction 1 24 - -
Viun10g02778 1272 MobiDBLite consensus disorder prediction 851 921 - -
Viun10g02778 1272 Gene3D Coactivator CBP, KIX domain 20 99 IPR036529 GO:0003712|GO:0006355
Viun10g02778 1272 MobiDBLite consensus disorder prediction 684 705 - -
Viun10g02778 1272 MobiDBLite consensus disorder prediction 368 474 - -
Viun10g02778 1272 Coils Coil 229 249 - -
Viun10g02778 1272 MobiDBLite consensus disorder prediction 498 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02778 Viun-Chr10 40693433 40707879 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02778 K14972 - gmx:100805336 1774.21