Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02777 ATGGATACAAACGATTGGAGAGCTCAACTACCACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGACACATTAAAAAAACACCTTCCTCTTTCTGGTCATGACGGAATGAATGAACTACGGAAGATTGCTACAAGGTTTGAAGAAAAGATTTTTACTGCTGCAACAAGCCAGCCTGATTATCTACGGAAAATATCTATGAAGATGCTTACAATGGAGACTAAATCCCAAAACACCCTGGCTAACAATCAAGTTGGCACTAGCAATAAACCTACAGATCAAGGACTTGTTTTGCAGCCTCAAGTTCATAATCTTGGGCAACAACATTCTGTTCCTTTGCCTAGTCAGATGCAGTCACATCAGCAGCTTCTATCTCAAAATGTTCAAAATAATGTTGCATCGCAACCTAACCTTCCACCTGTATCTAGTCTAGCCCAGACTCCCAGCCAAAATATTGTCCAGAACTCTAACGTACAGAATATACCTGGGCCAAATTCAGTTGGAAGCACTATTAGCCAAAATTCCAACTTACAGAGTATGTTTCCTGGTTCTCAGAGAACAATGCCAGGAAGGCAGCAGGTTGGTCCCCCACAACAACAGCTGCAATCACAGAATCCACAGCAATTTCTTTACCACCAGCAGCAGTTACTGAAGCAGAAGCTCCAGCTTCATTCTCAGATACAGCAGCAGCAACAACAGCAAAGCCTTATGCAACCAAATCAGTTGCAATCTTCTCATCAATCTACTAGTGTTCAACAGTCAATGCAGTCAATGCCTCAGCAACATTCACAAGTTATGAGGCATCAACAACAGACTTCTATGGTACATCAACAACAAACACCAGTCACTCAACAGACAATCTTACCCTCACAACAGCAACAACTTATGGGACCTCAGTCAAATACAACAAACATGCAACATTCCCAAATGCTTGGGCAACAGAACAATGTTGGTGATATACAGAAATCTCAGAGGATGCTTTCACAACAAAGTAATCTTACAAGCCTGCAACAGCGACAACAGTTAATAAATCAGCAAAACAACCCAGCAAATGTACATCAACAACAATTGGGAAATAATGGCCCTGGGTTACAGCAGCAGCATTTGCTTGGACCTGACTCTGGCAATGCAGACATGCACACAAGTCATCACTCTGCACACATGCTGCAACAACCAAAGGTTCCAATGCAGCAACAATCACAACAAAATTCGTCAAATTTGTTGTTACCTCATTCACAGCAGTCACAGCCACTGGGTTCACAACAGCAATTAATGTCTCAGATTCACACTCAGCCCACACAGTTGCAACAGCAATTGGGCTTGCAGCAGCAGCAGCAGCCAAATCCCTCACAACGTGATATGCAGCAAAGAATTCAAACATCAGGATCCTTACTTCAACAACAAAATGTTCTTGATCATCAAAAACAGTTGTATCAATCTCAAAGAAATCTTTCAGAAACATCAGCAACTTCTCTGGACTCTACAACACAGTCTGCACAACCTAGTGGAAATGATTGGCAAGAAGAAGTTTACCAGAAGCTCCAAGCCATGAAAGAAAGTTATTTGCCAGATATGAATGAATTGTACCAAAAAATTGCTAATAAACTTCAGCAGCATGATTCTCTTCCCCAACAGTCCAAACCAGATCAGCTTGATAAGATGAGGGCATATAAAATGATGTTGGAGAATATGATGACATTCGTACAGATTCCCAAGATCAGCATTTTGCCTCACTACAAGGAGAAATTGGTACCATATGAGAAGCAGATTGTAGGTCTCCTAAATCAAAGTAGACCCAGGAAAGGACAGATTCCCCAAACCCATATGTCCTCCATGCAACAGCCCCAATCCCAAGTTACGCAATTACAGTCTCATGAAAATCAAATGAACTCTCAGCTGCAGTCAACAAATTTACAAGGTTCTGTGCCAACCATGCAGCAGAATAATATTGCAACCTCTCAGCACAATCCTTTGTCGGGTGTATCAGCAGGACAGCAGAATATGATGAATTCGATGCAACCTGGAACTAGTTTAGATTCTGGACAAGGAAATTCTGTGAACTCCCTTCAACATGTTCCAATGAACTCCATGCAACAAACTCCTGTCAGTACTCCTCAACTACAGACTAACATTAATTCCTTACAATCACAAGGTGGGGCAAATGTCAGTCAACCAAATTCCCTTCACTCAGGTTCCAGTGCACTTCAACACCAACTGAAACATCAGGAACAGCAGATGCTGCAGAATCAGCAATACAAACAATATCATCAGCAGCGAATGTTGCAGAGGCAGCTCCTTCAGCAGCAGCAACTACACCATCCAGCGAAGCCACAGCTATCTGCACAATTGCAAACACATCAAATGTCCCAGCTTCACCAAATGAATGATATAAATGACTTAAAAATGCGACAAGGAATTGGTGTTAAGCCAGGGGTCTTTCAACAACATCTTACATCAGGTCAACACTCAGCATATTCCCATCAACAGCTGAAACAAGGGAATGCATTTCCTGTTTCTTCACCCCAACACCTTCAGGCTCCATCTCCGCAGATTCAGCAACATTCATCTCCCCAGGTTGAGCAACAAAATCATCTCCCGTCTAAAACTAAAGTTGCAACTCCTCTGCAATCTTCTAATTCACCCTTTGTAGGACCTACCCCTTCACCTCCTTTGGCTCCATCTCCTATGCCAGGGGAATCTGAGAAGTCCATTCCCTGTGTTTCATCAATATCGAATGCCACAAATATTGGACATCAACAAACAGGGGGTGCAGTAGGACCACCTCAATCCCTTGCCATTGGGACTCCTGGGATTTCAGCGTCTCCTTTATTGGCAGAATTCAGTGGTCCGGATGGTGCGTATGGCAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCCTAATTAATGTGGTAAAATCAATGTCATCTAAAGCATTGAGTGCTGCTGTCAGTGATATTGGTTCAGTTGTCAGCATGAATGATAGAATAGCAGGATCAGCTCCAGGTAACGGATCCAGAGCAGCTGTTGGTGAAGATTTGGTTTCCATGACTAATTGTCGCCTTCAGGCTCGAAATTTCATTACCCAAGATGGTACCAATGGAATTAAGAGGATGAAACGTTACACAAGTGCTATACCCTTGAATGGTGTATTATCTGCTGGTAGCATGAATGATAGCATCAAGCAGTTAACTGCTTCGGAGGCTTCTGATCTAGAGTCAACAGCAACATCCAGTGTCAAGAAACGGAAAATCGAGGTTAACCATGCCCTTTTGGAAGAAATAAGGGAGATTAATCACCAACTTATCGACACAGTAGTAGACATAAGCAATGTTGATCCAACACCTGCTGTTGCCGCTGATGAAGGAGCAGAAGGAATCCTTGTCAAATGCTCTTTCATTGCTGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCAGCGCAGATGTCACCTATTCAACCCCTGCGTTTATTGGTCCCTGCAAATTATCCTAATTGTTCTCCCATACTCCTAGACAAATTTCCAGTTGAATCCAGTAAGGAGAATGAAGATCTTTCGGCGAAGGCAAAGGCAAAGTTTAGCATTTCTTTGCGCAGTTTATCACAACCTATGTCACTTGGGGATATAGCAAGGACTTGGGATGTTTGTGCTCGCAGTGTTATTTCTGAGCATGCCCAACAGAGTGGGGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGCTTGACCACAAACTAA 3774 0.429 MDTNDWRAQLPPDSRQRIVNKIMDTLKKHLPLSGHDGMNELRKIATRFEEKIFTAATSQPDYLRKISMKMLTMETKSQNTLANNQVGTSNKPTDQGLVLQPQVHNLGQQHSVPLPSQMQSHQQLLSQNVQNNVASQPNLPPVSSLAQTPSQNIVQNSNVQNIPGPNSVGSTISQNSNLQSMFPGSQRTMPGRQQVGPPQQQLQSQNPQQFLYHQQQLLKQKLQLHSQIQQQQQQQSLMQPNQLQSSHQSTSVQQSMQSMPQQHSQVMRHQQQTSMVHQQQTPVTQQTILPSQQQQLMGPQSNTTNMQHSQMLGQQNNVGDIQKSQRMLSQQSNLTSLQQRQQLINQQNNPANVHQQQLGNNGPGLQQQHLLGPDSGNADMHTSHHSAHMLQQPKVPMQQQSQQNSSNLLLPHSQQSQPLGSQQQLMSQIHTQPTQLQQQLGLQQQQQPNPSQRDMQQRIQTSGSLLQQQNVLDHQKQLYQSQRNLSETSATSLDSTTQSAQPSGNDWQEEVYQKLQAMKESYLPDMNELYQKIANKLQQHDSLPQQSKPDQLDKMRAYKMMLENMMTFVQIPKISILPHYKEKLVPYEKQIVGLLNQSRPRKGQIPQTHMSSMQQPQSQVTQLQSHENQMNSQLQSTNLQGSVPTMQQNNIATSQHNPLSGVSAGQQNMMNSMQPGTSLDSGQGNSVNSLQHVPMNSMQQTPVSTPQLQTNINSLQSQGGANVSQPNSLHSGSSALQHQLKHQEQQMLQNQQYKQYHQQRMLQRQLLQQQQLHHPAKPQLSAQLQTHQMSQLHQMNDINDLKMRQGIGVKPGVFQQHLTSGQHSAYSHQQLKQGNAFPVSSPQHLQAPSPQIQQHSSPQVEQQNHLPSKTKVATPLQSSNSPFVGPTPSPPLAPSPMPGESEKSIPCVSSISNATNIGHQQTGGAVGPPQSLAIGTPGISASPLLAEFSGPDGAYGNALAATSGKSTVTEQPLERLINVVKSMSSKALSAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTNGIKRMKRYTSAIPLNGVLSAGSMNDSIKQLTASEASDLESTATSSVKKRKIEVNHALLEEIREINHQLIDTVVDISNVDPTPAVAADEGAEGILVKCSFIAVALSPSLKSQYASAQMSPIQPLRLLVPANYPNCSPILLDKFPVESSKENEDLSAKAKAKFSISLRSLSQPMSLGDIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02777 1257 Coils Coil 214 234 - -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 836 906 - -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 669 690 - -
Viun10g02777 1257 SUPERFAMILY Kix domain of CBP (creb binding protein) 3 77 IPR036529 GO:0003712|GO:0006355
Viun10g02777 1257 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 2 322 IPR044661 GO:0003713|GO:0031490
Viun10g02777 1257 MobiDBLite consensus disorder prediction 353 459 - -
Viun10g02777 1257 FunFam Mediator of RNA polymerase II transcription subunit 15a 5 83 - -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 836 883 - -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 716 753 - -
Viun10g02777 1257 Pfam KIX domain 4 83 IPR036546 -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 767 788 - -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 233 262 - -
Viun10g02777 1257 Gene3D Coactivator CBP, KIX domain 5 84 IPR036529 GO:0003712|GO:0006355
Viun10g02777 1257 MobiDBLite consensus disorder prediction 483 507 - -
Viun10g02777 1257 MobiDBLite consensus disorder prediction 156 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02777 Viun-Chr10 40693433 40707879 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02777 K14972 - gmx:100805336 1741.47