Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02765 ATGCCTCCAAGATCAGGAAAAGGGAAATCAAATAAAGCAAAAGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGCAGCACCTTCTCTTGTTGACATCAATGTGGTGACTCCATATGATACCCAAATTCTCTTGAAGGGTATCTCGACTGATAAGATACTCGATGTGAGGAAACTATTGGCTGTGAAGGTGGAGACATGCCATTTCACAAACTATTCTTTATCTCATGAGGGTAAAGGTCATAAATTAAATGACAGAGTGGAAATTGTTACCCTAAAGCCATGTCTTCTGAGAATGGTTGAAGAGGATTACACAGAGGAGGCCCAAGCAGTTGCGCACGTGCGGAGGGTCTTGGATATTGTGGCATGCACAACAAGGTTCGGTAGGCCCAAAAGGAGTTTACCAAGCCCAGAATCGAGGCCCAAGAAAAACGGGAAGGCCCAACACCAGAACAAGACGAGTTTGAGCCCACCTGAAACACCGAATGGGGAATCCCGGGTCGGGTCACCATCGTCGGAGGCGCCACCGTCGGCGATCTCCGACAATGTGGGGATGAAGGCCATTCACCCGACGCCGAAGCTCTCAGATTTCTACGAGTTCTTCTCCTTGTCTCACCTCTCTCCCCCCATTTTACAATTGAAGAGATGTGAAGTGAAGGATGAAGATGATAGGCGCAAAGGGGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAGGTAATAGAAGTAGTTGTTTCAGAGAAAGGGTTTTACACTGTGGGGAAGCAGTCTCTGCACAGCCACACCTTGGTTGATCTTCTGCAACAGCTCAGCCGAGCCTTTGCTAATGCATATGAATCGTTGATGAAAGCCTTTTTGGAACGTAATAAGTTTGGAAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTAGCCGAGTCTCCTTCAAGCTTTCCTTCATTACCCGCGGAGGATGAAAACTGGGGTGGTAATGGTGGTGGCCAAGGAAGAAATGGCGAATTCGATCTTAGACCGTGGGCAACGGATTTTGCAATATTGGCTTCTCTTCCTTGCAAAACTGAGGAGGAGAGAGTAGTCAGGGATAGAAAAGCATTTCTTCTTCACAATCAATTTGTTGATACCTCAATATTTAAGGCTGTTGCAGCTATCCAGCACATCATGGAATCCAACAAAAACATGAAGAATGAATTGAATTCTTCTCCGGGTGCTGTTCTGCATGAAGATCAAATGGGAGACTTGTCCATTACAGTCAAACGTGACATCCAGGATGGAAATAAAAAGCATGATTCTTTGCAAGTTGAATCCATCGTGCAAAAGGAGGATGTTCAGAAGAATTTAATCAAAGGATTGACAGCTGATGAAAGTGTAATTGTTCATGATACTTCTTCCTTGACTGTCGTTGTTGTACACCACTGTGGATATACTGCAACAGTAAAGGTTGTGGGTAATGTGAACATGAGGAAGCCCAAAGTTCGAGACATTGAGATAGACGATCAGCCAGATGGTGGGGCAAATGCTCTCAACATCAACAGTTTGAGGCTACTGCTTCACAAGTCTGGATCTGATTCATTAGAAGTGAATGTATCATCCCCATCAATTTCGGATGACGAAGATGCTACTAAAAGCCTTGTTCGAAAGGTTATTCAAGAAGGCATAGAGAAAATAAAGGAGGAGCCAAGTGTTTCAGAAAGGTCTATTAGATGGGAACTTGGTTCCTGTTGGATGCAGCATTTGCAAAAACAGGAAACTTCAACTGATAACAGTTCCAAAAACAAAGAAGATGGAAATGACGTTGAGCAAGCTGTTAAAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAAAAGAGAGAAGAAATCAAATAATGTAGACGGTGCAGATTCTATAGAGCAAAATGATTCTAGACCCGGAGATGTGAATGACAATGCTGATAAAGTTGAGCCGAACAGTGATGACTTGAGTAACTCAAATGAATTAGAGAAACTACTTTCTAAAGAAACATTTTTGCGACTCAAAGAATCTGGAACTGGTCTTCACACGAAGTCAGTGGATGAGCTAATCAGCATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGCTATGGACTTTGGATCACTTGAACTTTCTCCTGTGGATGGGCGAACACTGACTGACTTTATGCATTTAAGAGGCTTAAAGATGCGATCTTTGGGTCAAGTGGTTAAACTTGCTGAGAATCTTCCTCACATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCTTTCAAGCACCAACTTAAAGCAGTTATTGCCTCTGTTGACAATGTAGCTGATCTATCTGCAGCCATTGCATCAACACTAAATTTCTTACTTGGTGGGAGTCGAACAGAAGATAATGATCAAAGTTTGAATGATGATCATAATCTCAAAATTCAATGGCTTCGAACGTTTTTGTCCAAAAGATTTGGGTGGACACTGAATGATGAATTTCAACATTTGAGGAAGCTGTCAATTCTCAGAGGGCTATGTCACAAGGTTGGATTGGAATTATTCCCCAGAGATTATGACATGGAGTCTAGTAAGCCCTTTGGGAAAAATGATATTATCAGCTTGGTTCCTGTTTGCAAGCATGTAGGGTGCTCCTCAATTGATGGACGCAATTTGTTGGAGGCTTCAAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTGGCTAAAATGATGGTTGTTTGTGGACCCTATCATCGAAATACTGCAAGTGCATATAGTCTTCTAGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTTGGTCTTGACCACCCTGACACTATGAAAAGCTACGGGGATCTTTCTGTTTTCTATTATCGTTTGCAACACATTGAGCTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTTCTTCACTTTACATGTGGGCTGTCTCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCATGTGGCACTGAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCTGCTAGCTACCACGCCATAGCTATAGCTCTTTCATTGATGGATGCATTTTCTCTGAGTGTGCAACATGAGCAAACTACACTAAAGATACTTCAAGCAAAGCTTGGATCAGAAGACCTTCGTACACAGGATGCTGCGGCATGGCTTGAGTATTTTGAATCAAAAGCCATAGAGCAGCAGGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCTTGGATTTTATCAGTCCTGATCCGAAAAGAAATGATGCACAGAGAAAACAGAGGCGTGCAAAGTTGCTCCCAGCAAGTGATAACAGTCAAGAACCTGAAGATGCAGTAGCTGAGGAGAGCATTGTTTTTTATGACTCAAGAGATGCTCCAAGCATGGTAGAAGAGAATATAGAAGAAACCAATGACACACGTGATTCTCAAATACCAAAAGAAAATGGTGATTTCACAAGTTACAGGCCAGTGACAAGTGAAGTTGTTTATGAGGCATCCTCAGATGAGGGTTGGCAAGAAGCAAATTCAAAAGGGCGATCAGGAAATGCTGCTAACCGCAAGTTCGGCCACAAAAAGCGACCTCTTCTATCAAAGCTCAGCATCAATGGTTCTAATAATTACATTTACAGGGAAAGCAGTTCTAGGAATGAGATTACTTCACCACCACAAAGAGGAGTTCCTAGAGCAATTTCAGACATGTCATCTCCGTCTAGACAACCAAAAGCTCGAAACATCGCTTTGACCGAGGATTCTGTTAATTATCCAACAAAAAATTCTGTGTCAAAAATTTCATCTCCAGCATCTCTAAGTTCCTTGGCTTCAAAGTCTATATCTTACAAAGAAGTAGCTCTGGCTCCACCAGGTACAGTTTTAAAGCCACTGTTGGAAAAGGCTGAGATGGAGAAGATTAATGCTGAAGATGAGACATGCAGCAGTCTACCTGTGACATCAACCAACGAAGGTACGTGCCGAAGTTCCATAGTTAATGCAGTTTCTGAGCATGATGAAACAGAGGAAACTCAAGAAATTGAACCTCAACAAGAAAATTCTGCATTGGAAGCTGAGAAGGTTTCCCTTGCTTCTTCTGATCAGGAAAAACCTACAGAAACAAATGGCAGTAAGCTTTCAGCTGCGGCCAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGGTTCCTTCACTAGCGTGTATGATACAGATGTTAGTCAAGGCATGCATGTGGAGCCAGTGTTTCCCCCTGCTGTTGCCAGGGTCCCTTGTGGACCTAGATCACCTCTATATTACAGAACCAACTATACTTTCCGCATGAAACATGGTTTTAGTAAAAGCCAAACACCTACCGGAGAAAGAACCGGATTTGGATCTCCAAGAATAATGAATCCTCATGCGCCTGAGTTTGTTCCCAGAAGTGCTTCTCAGATAGAAACCAATGATTCTAATTCAAATGTTTCTGATGACATGGCAGAAAAAAATGAAAATTTTGCTGAAATCAAGGCAAGTCCCACAAAAAACAGTATTTCTGAATCCGAGAAGTCCGAGATAGCAAGGCAGATATTGCTCAGTTTTTTAGTGAAATCTGTCAAGGAAAATATTGATTCTGTGGATGAATCTAACAACAGTGAAGGAAAAGTTGGGAAGTTTGAAAATTGTGATGATGAAGTAGCTAAAGACAGTGCTGTCATAAACATTATGTATGGAAATGAAGAAAAGAGTAAGGCAGTGCCTCATTCCAGTGATAGTGATGAGCAAGAGACATTAGGTGTTAGTGAAAAAAAGAATGGTGATGAAGGGTTCATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAGATCACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCATCAGTTCGTTAA 5091 0.4182 MPPRSGKGKSNKAKAEKKKKEEKAAAPSLVDINVVTPYDTQILLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEGKGHKLNDRVEIVTLKPCLLRMVEEDYTEEAQAVAHVRRVLDIVACTTRFGRPKRSLPSPESRPKKNGKAQHQNKTSLSPPETPNGESRVGSPSSEAPPSAISDNVGMKAIHPTPKLSDFYEFFSLSHLSPPILQLKRCEVKDEDDRRKGDYFQLQVKICNGKVIEVVVSEKGFYTVGKQSLHSHTLVDLLQQLSRAFANAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSSFPSLPAEDENWGGNGGGQGRNGEFDLRPWATDFAILASLPCKTEEERVVRDRKAFLLHNQFVDTSIFKAVAAIQHIMESNKNMKNELNSSPGAVLHEDQMGDLSITVKRDIQDGNKKHDSLQVESIVQKEDVQKNLIKGLTADESVIVHDTSSLTVVVVHHCGYTATVKVVGNVNMRKPKVRDIEIDDQPDGGANALNINSLRLLLHKSGSDSLEVNVSSPSISDDEDATKSLVRKVIQEGIEKIKEEPSVSERSIRWELGSCWMQHLQKQETSTDNSSKNKEDGNDVEQAVKGLGKQFKFLKKREKKSNNVDGADSIEQNDSRPGDVNDNADKVEPNSDDLSNSNELEKLLSKETFLRLKESGTGLHTKSVDELISMAHKFYDEVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLKMRSLGQVVKLAENLPHIQSLCIHEMITRAFKHQLKAVIASVDNVADLSAAIASTLNFLLGGSRTEDNDQSLNDDHNLKIQWLRTFLSKRFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMESSKPFGKNDIISLVPVCKHVGCSSIDGRNLLEASKIALDKGKLEDAVNYGTKALAKMMVVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSVQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPDPKRNDAQRKQRRAKLLPASDNSQEPEDAVAEESIVFYDSRDAPSMVEENIEETNDTRDSQIPKENGDFTSYRPVTSEVVYEASSDEGWQEANSKGRSGNAANRKFGHKKRPLLSKLSINGSNNYIYRESSSRNEITSPPQRGVPRAISDMSSPSRQPKARNIALTEDSVNYPTKNSVSKISSPASLSSLASKSISYKEVALAPPGTVLKPLLEKAEMEKINAEDETCSSLPVTSTNEGTCRSSIVNAVSEHDETEETQEIEPQQENSALEAEKVSLASSDQEKPTETNGSKLSAAAKPFNPGMLSMSHHLNSGSFTSVYDTDVSQGMHVEPVFPPAVARVPCGPRSPLYYRTNYTFRMKHGFSKSQTPTGERTGFGSPRIMNPHAPEFVPRSASQIETNDSNSNVSDDMAEKNENFAEIKASPTKNSISESEKSEIARQILLSFLVKSVKENIDSVDESNNSEGKVGKFENCDDEVAKDSAVINIMYGNEEKSKAVPHSSDSDEQETLGVSEKKNGDEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02765 1696 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 7 1425 IPR027523 GO:0006996
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1394 1441 - -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 620 661 - -
Viun10g02765 1696 SUPERFAMILY Hypothetical protein c14orf129, hspc210 225 291 IPR023231 -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 147 177 - -
Viun10g02765 1696 Gene3D Tetratricopeptide repeat domain 889 1002 IPR011990 GO:0005515
Viun10g02765 1696 SMART tpr_5 1012 1045 IPR019734 GO:0005515
Viun10g02765 1696 SMART tpr_5 970 1003 IPR019734 GO:0005515
Viun10g02765 1696 SMART tpr_5 928 961 IPR019734 GO:0005515
Viun10g02765 1696 MobiDBLite consensus disorder prediction 128 183 - -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1 24 - -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1196 1215 - -
Viun10g02765 1696 Pfam Tetratricopeptide repeat 927 997 - -
Viun10g02765 1696 Pfam Tetratricopeptide repeat 1011 1085 - -
Viun10g02765 1696 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 883 1133 - -
Viun10g02765 1696 Gene3D Tetratricopeptide repeat domain 1003 1120 IPR011990 GO:0005515
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1228 1253 - -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1406 1439 - -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1635 1658 - -
Viun10g02765 1696 ProSiteProfiles Clueless (Clu) domain profile. 322 594 IPR025697 -
Viun10g02765 1696 Pfam Translation initiation factor eIF3 subunit 135 715 857 IPR033646 -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1274 1304 - -
Viun10g02765 1696 CDD CLU-central 717 858 IPR033646 -
Viun10g02765 1696 ProSiteProfiles TPR repeat profile. 928 961 IPR019734 GO:0005515
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1139 1174 - -
Viun10g02765 1696 SUPERFAMILY TPR-like 891 1047 IPR011990 GO:0005515
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1639 1658 - -
Viun10g02765 1696 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Viun10g02765 1696 MobiDBLite consensus disorder prediction 1143 1160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02765 Viun-Chr10 40608467 40619685 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02765 K03255 - gmx:100801625 2791.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02765 10 40608467 40619685 Viun10g02765 10 40608467 40619685 ECH