Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02750 ATGGTTCTCATCACCACTCAGCCTAAAAACCCCATTTTTCATGGCTGCACCACCCTCCACCGCTCAATTCCACAGCGGGGTGATAGCACTGTTCTTGGCCTTGGCTCCATTAAAAACTTTAACTTTAACCAAAAACCAACCAAAATTTCCCTTAAAAGCAACCCCTTTACCTATAATCTGGCAGTGACAGCCAAAGCCAAGACCAATGCAGCATTTGGAGAAGTTGAGGCATTGAAACCCAGAAAGATTTTGTTGTCTGAAGTTGAGGTGAAGAGAGAGAGGAGTGTTCTCTTTGGGAGAAAATGGAACACTTTGGATGTTGGCACTGCTGGAATTGTGTTGGCCATGCATGTGCTTTGTCTCTTTGCTCCATTCCATTTCAATTGGCCAGCATTATGGGTGGCTGTGGCTCTCTATGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCACAGGAACCTTTCTCACAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTCCTTTGCCTATTGTGGGGTTCTGGCACTTCAGGGGAACCCAATTGATTGGGTAAGCACACATAGATACCATCACCAGTTTTGTGACACTGAGAGAGACCCTCATAGCCCCACTGAAGGGTTCTGGTTCAGCCATATGAGTTGGCTCTTTGATACCAATTCTATCATAGAAAGGTGTGGAGAGGCAAACAATGTTGGTGATTTAGAGAAACAACCTTTTTATAGATTTCTCAGAAGCACTTACCTTTTCCACCCTTTTGCTTTGGGAGCCCTTCTATATGCAGCAGGAGGATTTCCTTTCCTAGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTTTGGGGGAATCAGGCCTGGAACACCAGAGACTTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCTTTTGAGTATTCAGCTAGACATGGATTAGAGTGGTGGCAACTAGACATGACCTGGTACGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGAAGTCAAGTTACCCTCAGAGACTCAGAAACATAGAATGGCATTCAATAGTGATACAATAACCACATGA 1140 0.4465 MVLITTQPKNPIFHGCTTLHRSIPQRGDSTVLGLGSIKNFNFNQKPTKISLKSNPFTYNLAVTAKAKTNAAFGEVEALKPRKILLSEVEVKRERSVLFGRKWNTLDVGTAGIVLAMHVLCLFAPFHFNWPALWVAVALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYSFAYCGVLALQGNPIDWVSTHRYHHQFCDTERDPHSPTEGFWFSHMSWLFDTNSIIERCGEANNVGDLEKQPFYRFLRSTYLFHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLATEVKLPSETQKHRMAFNSDTITT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02750 379 CDD Delta9-FADS-like 129 360 IPR015876 GO:0016717
Viun10g02750 379 PRINTS Fatty acid desaturase family 1 signature 152 172 IPR015876 GO:0016717
Viun10g02750 379 PRINTS Fatty acid desaturase family 1 signature 189 218 IPR015876 GO:0016717
Viun10g02750 379 PRINTS Fatty acid desaturase family 1 signature 317 331 IPR015876 GO:0016717
Viun10g02750 379 PRINTS Fatty acid desaturase family 1 signature 274 295 IPR015876 GO:0016717
Viun10g02750 379 PANTHER ACYL-COA DESATURASE 79 369 IPR015876 GO:0016717
Viun10g02750 379 Pfam Fatty acid desaturase 129 348 IPR005804 GO:0006629
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02750 1 375 Lipid Metabolism Gene Families AT3G15850 64.230 7.05e-176 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02750 K20416 - gmx:100786391 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02750 10 40540944 40543118 Viun10g02750 10 40540944 40543118 ECH