Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02741 ATGGCTCTGGCACGTTCGGCTTTGAAAGATTTGCGACGAAAGTTGTTTGCTTCATCTTCCTTCACCAGCCATGGTTCTGGTGGCGTGCACAAGCAGAGGTGGAACAATGAATTGCTCAAAAGGTTTGCCACTGCAGCAGGAGATAAAGGAAAATCTGAAGCCACTGAAGTTGCTGTCACTGAAGGGAAAAAGTCTAACAAGTTGTTCCCCAGAAGGAGGAACAACAGAAGATGGATTTGGAGAAACCAAGATCGTGATTTCCCTCCAGCTCTCTATGAGTTCTTTCCTTCAGGGCTTGGGAATGCATTGTTGCAGGCAAGTGAGAACATCAACAGGGTGTTTGAGAGCATGAATCTGACACCTTGGTCTCTGAGTGGTCGTGTGAAAGAGGGAGATGATCATTACAAGCTGAGGTATGAGATGCCAGGAATGGCAAAAGAGGAGGTGAAGATCACCGTTGATGATGGAGTGTTGACAATCAAGGGAGAGCACAAGGAAGAGAAAGAAGAAGGTGAAGATGATGAGCATTGGTCATCAAGTAGCTATGGATATTATAACACAAGCCTTGTTTTGCCTGATGATGCTAAAGCTGATGATATTAAAGCAGAGTTGAAGGATGGTGTCTTAACTGTCACCATTCCTAGGACTGAGAAACCCAAAAAGGATGTGAAACAAGTCACAGTAGAATGA 690 0.4464 MALARSALKDLRRKLFASSSFTSHGSGGVHKQRWNNELLKRFATAAGDKGKSEATEVAVTEGKKSNKLFPRRRNNRRWIWRNQDRDFPPALYEFFPSGLGNALLQASENINRVFESMNLTPWSLSGRVKEGDDHYKLRYEMPGMAKEEVKITVDDGVLTIKGEHKEEKEEGEDDEHWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLTVTIPRTEKPKKDVKQVTVE 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02741 229 Gene3D - 93 229 IPR008978 -
Viun10g02741 229 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 113 229 IPR002068 -
Viun10g02741 229 Pfam Hsp20/alpha crystallin family 128 228 IPR002068 -
Viun10g02741 229 FunFam 26.5 kDa heat shock protein, mitochondrial 92 228 - -
Viun10g02741 229 MobiDBLite consensus disorder prediction 161 180 - -
Viun10g02741 229 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 228 IPR044587 GO:0009408
Viun10g02741 229 MobiDBLite consensus disorder prediction 161 177 - -
Viun10g02741 229 CDD ACD_sHsps-like 128 215 - -
Viun10g02741 229 SUPERFAMILY HSP20-like chaperones 114 228 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02741 Viun-Chr10 40501124 40502320 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02741 K13993 - gmx:100787482 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02741 10 40501124 40502320 Viun10g02741 10 40501124 40502320 ECH