Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02724 ATGAAAACAATGGCGTCGTTATTCTCTGCAACTGCAACCGTTATTCCTCGAAACCTCGCCGTGTCTTCTTCCGGCAAACGCTTTGTCGGCCACTCTCTTCTTTCTTCTTCTTCTCCGCCCTTCCTCTCATTTCCCACTCCCAAATCAAACCCTCGTAATCGTCTCACCGTTTCCCTCCAATCCCCACGCGCCCAATCCAGCGCGTCATCCTCTCCCTCCGCCACTTTCCACGGCCTCTGCTATGTTGTCGGCGACAACATCGACACGGACCAGATCATCCCCGCGGAATACCTCACCCTCGTTCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTGGTCGGCCTCCCCGCCTCCTACGCCACGCGTTTCATTGAACCCGGCGAGACCAAGACCAAGTACGCCATTGTCATCGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCGCCCGTAGCGTTGGGCGCCTCCGGCGCTGCCGCCGTGGTCGCGGAGTCGTACGCGCGGATCTTTTTCCGGAATTCGGTGGCCACCGGCGAGGTGTACCCGCTGGAGTCGGAGACCCGCCTCTGCGAGGAGTGCCGCACCGGTGATGTTGTCACGATCGAGCTCGGAGAGAGCCGCTTGATTAATCACACCACCGGGAAGGAATATCGGTTGAAGCCGATCGGTGACGCTGGTCCGGTTATTGAGGCTGGTGGCATCTTTGCCTATGCGAGGAAGTCCGGCATGATTCCCTCTCGTTGA 762 0.601 MKTMASLFSATATVIPRNLAVSSSGKRFVGHSLLSSSSPPFLSFPTPKSNPRNRLTVSLQSPRAQSSASSSPSATFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPASYATRFIEPGETKTKYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESETRLCEECRTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKSGMIPSR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02724 253 Gene3D Aconitase, domain 4 73 249 IPR015928 -
Viun10g02724 253 NCBIfam 3-isopropylmalate dehydratase, small subunit 80 246 IPR011827 GO:0016836
Viun10g02724 253 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 72 251 - -
Viun10g02724 253 SUPERFAMILY LeuD/IlvD-like 76 250 - -
Viun10g02724 253 Pfam Aconitase C-terminal domain 137 184 IPR000573 -
Viun10g02724 253 CDD IPMI_Swivel 82 209 IPR033940 -
Viun10g02724 253 MobiDBLite consensus disorder prediction 38 73 - -
Viun10g02724 253 FunFam Isopropylmalate/citramalate isomerase small subunit 73 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02724 Viun-Chr10 40411318 40413561 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02724 K01704 - gmx:100782688 381.333