Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02712 ATGATGGGATCCGGGTCGGGTTCTCTGGTGTGGTTCAGGAAGGGTATTCGGATCCACGACAACCCGGCTCTCGAGTTCGCGTCCCGAAGTGCCTCTCATCTCTACCCTGTCTTCGTCATTGACCCGCATTATATGAAACCCGACCCGAATGCTTTCTCACCCGGGTCATCGCGCGCGGGTCTGAACCGCATCAAGTTCTTGCTGGAGAGCCTCGAGGACCTCGATCTCAACCTCAAGAACCTTGGTTCGCGACTTTTGATTCTCAAGGGTGACCCAGCTGAAGTCGTCATTCATTGCTTGAAGGAGTGGAATGTCAAGAAGCTGTGCTTTGAGTACGACACTGAACCGTATTATCAGGCTCTGGATGTTAAAGTTAAGAACTTTGCACTCGCTGCTGGAATTGAGGTTTTCTCTCCTGTGAGTCACACACTCTTCAACCCCACAGATATTATACACAAGAACGGAGGAAAGCCACCACTTAGTTATCAATCGTTTGTCAAGCTTGCTGGGGAACCACCCTCTCCTCTCACAACCGTGTACTCTTCACTTCCTCCACTTGGCCATCTTGGAGGTTGTGATGTTTCTGAAGTTCCTACCATCACAGATCTTGGATATGGAGATGTTGAACAGGATGAGTTCTCTCCTTTCAAAGGGGGTGAGTCAGAAGCATTGAGGAGGTTGGATGAATGCATGAAAGACAAGAAGTGGGTGGCAAACTTTGAGAAACCAAAGGGTAATCCATCTGCATTTCTGAAGCCGGCAACAACTGTTTTATCACCATACCTGAAATTTGGTTGTCTATCTTCAAGATATTTCTACCAGCGAATTCAGGATATATATAGAAGTACGCCAAAGCATACATCACCACCTGTTTCTCTTACAGGACAGTTGTTGTGGCGAGAGTTCTTTTACACGGCTGCTTTTGGGACTCCAAATTTTGATAGAATGAAAGGCAATAGGATATGCAAGCAGATTCCATGGAAGGATGATGATAAACTGCTGGAGGCTTGGAGGGAGGGTAGGACGGGATTTCCTTGGATTGATGCTATCATGATCCAGCTACGCAGATGGGGTTGGATGCATCATTTGGCACGACATTCTGTCGCATGTTTTCTAACTCGAGGCGATCTGTTTGTTCACTGGGAAAAAGGACGAGATGTTTTTGAGAGGCTTCTGATTGATTCAGATTGGGCTATTAATAACGGGAACTGGATGTGGCTTTCTTGTTCATCTTTCTTTTATCAGTACAATCGTATTTATTCCCCAACCACATTTGGTAAGAAGTATGACCCTAATGGCGACTATATTAGGCATTTTCTCCCAGTCTTAAAAGATATGCCCAAAGAGTACATTTACGAACCCTGGACAGCTCCTAAAAGTATTCAAACCAAAGCAAATTGTATAATTGGTAAAGATTACCCAATGCCAGTTGTTTCTCATGATTCAGCGAGTAAAGAGTGCCGAAGGAAAATGGGGGAAACATATGCATTGAACAAAGAATTGAATGGTTTGGTTAGCGAAGATGATCTGAAAAACTTGAGGAGGAAACTAGATGAGAGTGAAAGGCAAGAGCCTCAAGGCAAAAGATATAAGCAAAAACTGATTGGCTAA 1611 0.4469 MMGSGSGSLVWFRKGIRIHDNPALEFASRSASHLYPVFVIDPHYMKPDPNAFSPGSSRAGLNRIKFLLESLEDLDLNLKNLGSRLLILKGDPAEVVIHCLKEWNVKKLCFEYDTEPYYQALDVKVKNFALAAGIEVFSPVSHTLFNPTDIIHKNGGKPPLSYQSFVKLAGEPPSPLTTVYSSLPPLGHLGGCDVSEVPTITDLGYGDVEQDEFSPFKGGESEALRRLDECMKDKKWVANFEKPKGNPSAFLKPATTVLSPYLKFGCLSSRYFYQRIQDIYRSTPKHTSPPVSLTGQLLWREFFYTAAFGTPNFDRMKGNRICKQIPWKDDDKLLEAWREGRTGFPWIDAIMIQLRRWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYIRHFLPVLKDMPKEYIYEPWTAPKSIQTKANCIIGKDYPMPVVSHDSASKECRRKMGETYALNKELNGLVSEDDLKNLRRKLDESERQEPQGKRYKQKLIG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02712 536 MobiDBLite consensus disorder prediction 516 536 - -
Viun10g02712 536 Pfam FAD binding domain of DNA photolyase 295 491 IPR005101 -
Viun10g02712 536 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 207 496 IPR036134 -
Viun10g02712 536 Pfam DNA photolyase 8 169 IPR006050 -
Viun10g02712 536 FunFam Cryptochrome-1 311 532 - -
Viun10g02712 536 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 187 IPR036155 -
Viun10g02712 536 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 144 IPR006050 -
Viun10g02712 536 PANTHER CRYPTOCHROME 8 498 IPR002081 -
Viun10g02712 536 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 311 535 - -
Viun10g02712 536 Coils Coil 64 84 - -
Viun10g02712 536 Gene3D - 193 310 - -
Viun10g02712 536 Gene3D - 142 183 - -
Viun10g02712 536 Gene3D HUPs 4 141 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02712 Viun-Chr10 40367520 40371707 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02712 K02295 - gmx:100780347 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02712 10 40367520 40371707 Viun10g02712 10 40367520 40371707 ECH