Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02694 ATGGAGTTGATTTCGGGTCTACCACAGGACGTAGCACGGGACTGTCTCATTCGGGTTTCGTACCAGCAGTTCCCCACGGTGGCGTCGGTGTGCAAGCTCTGGAAATCGGAGATTCTCTCGCCGGAGTACCACCGTCAGCGCCGTAGCACGAAACACGCGCAGAAGCTCATAGCGATGGCTCAGGCTCGACACCAACCGGGAACTGGTTCGACCAAGCGAGTGACGAACCCGGTTTACCGTCTCAGCGTGTTCGAACCGGAAACGGGTCACTGGACCGAGCTGCCACCACCGCCCGAGTTTTGTTCCGGGTTACCTATGTTCTGTCAGTTAGTTAGTGTGGGGCACGATCTTGTCCTTTTGGGCGGGCTGGACCCGAATTCGTGGGAAGCATCGAATTCCGTGTTTGTGTACAATTTCTTGTCGGCGGAGTGGCGCCGCGCTGCGGACATGCCGGGTGGGCCCCGCACGTTTTTCGCTTGCGCGTCGGATTCTAAGGGGACGGTTTTTGTCGCCGGAGGACACGACAACGAGAAGAACGCGCTGCGTTCGGCGCTGGCCTATGATGTTACCTCGGACCGGTGGGTTTCGCTTCCCGACATGGCGGCGGAGCGGGACGAGTGCAAGGGCGTTTTCCGTCGCGGGAAGTTCTTCGTGGTCGGGGGCTACCCGACGGAGACGCAGGGAAGGTTCGAGAAGAGCGCGGAGGAGTTCGATCCTGCTACATGGCGCTGGGACGAAGTGAAAGAGAACTTCTTAGATTGCGCCACGTGTCCGAGGACGTTAGTGGACGGTGGTGATGACGAGGCGGTGTTTCTGTGCAGCGGCGGGGACTTGATCTCGCTTCGTGGCAACACGTGGCAGAAGATATCAACGGTGCCGGGGGAGATACGCAACGTTGCGTACGTTGGGGCGTTTGATGGGACACTGGTTTTGATTGGATCTAGCGGCTACGGTGAAGTCCACGTGGCTTTTGCCTTCGATTTCGTGAGTTGCAACTGGAGGAAACTGGATTGCCCAGAAGGGTTCACGGGCCATGTCCAAACCGGTTGCGTTTTGGAGATTTAG 1065 0.5831 MELISGLPQDVARDCLIRVSYQQFPTVASVCKLWKSEILSPEYHRQRRSTKHAQKLIAMAQARHQPGTGSTKRVTNPVYRLSVFEPETGHWTELPPPPEFCSGLPMFCQLVSVGHDLVLLGGLDPNSWEASNSVFVYNFLSAEWRRAADMPGGPRTFFACASDSKGTVFVAGGHDNEKNALRSALAYDVTSDRWVSLPDMAAERDECKGVFRRGKFFVVGGYPTETQGRFEKSAEEFDPATWRWDEVKENFLDCATCPRTLVDGGDDEAVFLCSGGDLISLRGNTWQKISTVPGEIRNVAYVGAFDGTLVLIGSSGYGEVHVAFAFDFVSCNWRKLDCPEGFTGHVQTGCVLEI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02694 354 PANTHER OS02G0208700 PROTEIN 2 354 IPR044595 GO:0080037|GO:2000762
Viun10g02694 354 CDD F-box_AtAFR-like 3 47 - -
Viun10g02694 354 Gene3D - 65 343 IPR015915 GO:0005515
Viun10g02694 354 SMART kelc_smart 116 164 IPR006652 GO:0005515
Viun10g02694 354 SMART kelc_smart 167 214 IPR006652 GO:0005515
Viun10g02694 354 Pfam Kelch motif 105 155 - -
Viun10g02694 354 SUPERFAMILY Kelch motif 76 336 IPR015915 GO:0005515
Viun10g02694 354 Pfam Kelch motif 165 200 IPR006652 GO:0005515
Viun10g02694 354 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02694 Viun-Chr10 40192904 40194377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02694 7 294 Miscellaneous Gene Families AT4G33900 23.975 1.28e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02694 - - gmx:100796602 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02694 10 40192904 40194377 Viun10g02694 10 40192904 40194377 ECH