Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02691 ATGGCTACCCCGGTTGAAGAAAACAACGTTGAGTATGATAGTGATCCCGAAGAGGCAAAGAGACCGTTAACAATGCGGAGGCGCGAAGCAAGCGATGACGAAGAAGAAGCCGAAGGAGAAGAAGTCACTGATAAGAGGGAAGTTGGTAGAGTAGAGGTTCGTTCTGAAGATGACATAGATGATGAAGGAGGTGTTGAAGATTATGCTAATGATGGTGATGATGTTGAAGAAGGAGAAGAAGAATTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGAAGAAATGTACGAGGAGAAGGGTGCAAGTTGGGGGGTTGAGGCTGAGGGTCCAGTGGTTGTGGCTAAGGAATCTGATGATTATGATGTCAGACCCCCTTTGGAAGATTCTGCTGAGGACCATTCCGAGGAGAAAAAGGAGTCTGATCCATTTGCGGTGCCCACAGCCGGAGCTTTTTACATGCACGATGATCGATTTCGGGACAATGCTGGTACCCGCAACAGATGGATACATGGTGGAGGAAGGAGACTGTGGGAATCCAAAGATGACAAGAAATGGGGTCATGATAAATTTGAGCAAATTTTGCACGAAAAGCATTATGAGGAGAGGAGACCTTCTAAGGGTAATTATCGTGGTCGTGGTAATGGTCGAGGCACTGATTATAGAGGGTACGTACGAGGAAGTAAGAAAGGATATGATAGCAGCAGCGATCAAAATCAGACACCTAAGAGTGTTGTGAGAGGGAGAGGCCCCCAAAGGTATGAACGTAGCAACAAATTCAATGGTCCATCTCCCCAAGTGCAAAATAAACAATCTGGGAAATCTCGTGTGAGAAATTCAAATGTTAGTTTGGAGAGGACTTCGACACGATCTTCCCATGCAGAATCTGACACTGTGCCTGCTAAAAATCAAATGCTCGCATCAAATTTGAATTCAGCTTCCCCACCATATTACCCATCAGGCTCTTCCAGCAATGATATTAATTTGGCACAAAAAAGGGAGGTGCAAACCGGTGGTGGTAGAAGGAATGTTGGTCCTGTTGTCGTGGATGAGGGTTTTCCAGTTCAACAAAAGAATGCTCCGATTCAGGGAAAGAATGTTGTTGATTCCATCAGCATGTCAAAGTTGTATATTAATGAATCCACCCCTCAATCTGTTGGAAAGCCTTCGAACAATGTCCGTATGGCACGACCTGGATCTTCTGTTGTCGATGCTTCTCAATCTCCTCACCCAAGGGCTTCTGGGTCTGGGAGGGGAGTATCAATCCCAGTACAGACAAATTTTCAGCGTTCTAATAAAGTTTCTCCATCAGAATTCCAGGCTATTCAGACAAGCACTGTTCCGGGTAGGAATTCAACTTCTGTGCAACCTACTGCCCCACAGTTGGGCCAAAGACCTGGCAGTGGGTCTCCACTGTCTCCCCCCTCCAAAACATCCATTCCAATTAATTCACATGATTCTGGAGAATTGGATTCAGGGTCAGAATCAGGTAAAGGCAAAGGGGCTTTGGTTGGGAAGGGGAGAGGAGGTTCACATGGCGCAGGAAGGGGAGCTTTTGTTTATGGTGGGGCACAAGTAATAGGCACCGCTGGAAATGTGGGTGTTAGCCATGGAGATCCAAACTTCCCTGCCTTCTTGCCGGTCATGCAATTTGGGGGCCAGCATCCTGGGGGTATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAATTGGGAAAGTCAGAAATGACATGGCTACCAGTCTTGGCTGGTACTGCAGGAGCTTTAGGGGCTACATACCCATACCTTGCTGTTGATGGTGCAAGCAGTCACCAATCTGGACAGGCCTCTGCAATGGGTACCTCAAGCAAGGACCATAATGTTAACAAAGCTAATAATGAATTGAAGCCACCTCAGAAATCTGAGCTTGCAAGTGAAGAGTTTGGACAAAGGCAGAATAAACCCCGAAGATACTCAGAGATGAATTTTGGTCAGTGA 1992 0.4649 MATPVEENNVEYDSDPEEAKRPLTMRRREASDDEEEAEGEEVTDKREVGRVEVRSEDDIDDEGGVEDYANDGDDVEEGEEELQEEEEEEEEVEEMYEEKGASWGVEAEGPVVVAKESDDYDVRPPLEDSAEDHSEEKKESDPFAVPTAGAFYMHDDRFRDNAGTRNRWIHGGGRRLWESKDDKKWGHDKFEQILHEKHYEERRPSKGNYRGRGNGRGTDYRGYVRGSKKGYDSSSDQNQTPKSVVRGRGPQRYERSNKFNGPSPQVQNKQSGKSRVRNSNVSLERTSTRSSHAESDTVPAKNQMLASNLNSASPPYYPSGSSSNDINLAQKREVQTGGGRRNVGPVVVDEGFPVQQKNAPIQGKNVVDSISMSKLYINESTPQSVGKPSNNVRMARPGSSVVDASQSPHPRASGSGRGVSIPVQTNFQRSNKVSPSEFQAIQTSTVPGRNSTSVQPTAPQLGQRPGSGSPLSPPSKTSIPINSHDSGELDSGSESGKGKGALVGKGRGGSHGAGRGAFVYGGAQVIGTAGNVGVSHGDPNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGKSEMTWLPVLAGTAGALGATYPYLAVDGASSHQSGQASAMGTSSKDHNVNKANNELKPPQKSELASEEFGQRQNKPRRYSEMNFGQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02691 663 Pfam CASC3/Barentsz eIF4AIII binding 129 213 IPR018545 GO:0003729|GO:0006397|GO:0035145
Viun10g02691 663 Coils Coil 68 102 - -
Viun10g02691 663 PANTHER PROTEIN MLN51 HOMOLOG 1 663 IPR044796 GO:0003729|GO:0006397|GO:0035145
Viun10g02691 663 MobiDBLite consensus disorder prediction 609 663 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 443 489 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 14 33 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 379 422 - -
Viun10g02691 663 SMART Btz_2 112 215 IPR018545 GO:0003729|GO:0006397|GO:0035145
Viun10g02691 663 MobiDBLite consensus disorder prediction 112 142 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 256 331 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 230 245 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 193 348 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 58 96 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 443 510 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 609 637 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 1 173 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 42 57 - -
Viun10g02691 663 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02691 Viun-Chr10 40180566 40185623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02691 - - gmx:100792594 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02691 10 40180566 40185623 Viun10g02691 10 40180566 40185623 ECH