Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02679 ATGGCTTTGAAAATTCGGCTGGAGAGAATACAGAATAGGAAGAAAGCAGTGCTGAAGTTTTTGAAGAGTGACATCGCAGAGCTTCTTAGGATTGGCCTTGAATACGATGCATATACAAGGGCTAAAGGGCTTCTGTTAGAGCAGAAAATGTTATCATGCTATGAACTCGTTGAAAACTTTGTTGGATGCATATCAGATCATGTTGAAGACATAGCAAAGCAGAAGGATTGCCCTGATGAATGCAAGGAAGCTGTGCCATCATTGATATATGCTGCTGCAAGATTTGGTGATCTCCCAGAATTGCTTGAGCTCAGAACATTATTTACCGAGAAATATGGGAATTCTCTTCAACCTTATATAAACAAAGAGTTTGTTGAGAGGCTGAGGCAAGATCCACCTACAACAGAAATGAAGATTGGACTGTTATATGATATAGCACAAGAATTCTACATAGAATGGAATGACAAGTCTCTGAGAGAAAGACTTCATATAGAAGAGAAGCCTATTTGTGGAGAAGATTTCAATAGATCAAAAGCAAAGGAAAGAGAAGGAAGGAAAGATTTGAATGAGGAGTCATGGATTCATGAAAGAAGTAGCAGTGATGATGAAACAAGTCTTTCATCTAATGATGGTAGAAAGGATACTACTAGTTCAAGTTCATTGGGAAGCATATCTGAGGATGAAGTTGAAAAAATTGAAACCAACAAGCCAATTTCTTCCTATTGGCGCATTCCACCTCCCTACGTCAAACAAAAGACCAACAAAAGTGTTTCAAACAGAAAAACACATGCTGACACTGCAACAACACCAGATTCAGGAGGAATGAAATCAGACAGAAAAAAACATTATTCTTCTCAACAACCAGAACATGATTCTGAGCAAAACAGAAGGCGTAGAAGCTCACATGTCAGAGGAAAATCTCTTCCTTCTGAACCCAACACTGCAGTGGAATCATCAAAAGGGCATGTACGAACAATTTCCTTAGAATCTGGAATGCGGGGTGGTGCATGGCGTGTGCATCCGAATCTACCCGATTATGATGATTTGAGAGCTCGTCTTTTAGCTCTGCGACACAGATAA 1080 0.3963 MALKIRLERIQNRKKAVLKFLKSDIAELLRIGLEYDAYTRAKGLLLEQKMLSCYELVENFVGCISDHVEDIAKQKDCPDECKEAVPSLIYAAARFGDLPELLELRTLFTEKYGNSLQPYINKEFVERLRQDPPTTEMKIGLLYDIAQEFYIEWNDKSLRERLHIEEKPICGEDFNRSKAKEREGRKDLNEESWIHERSSSDDETSLSSNDGRKDTTSSSSLGSISEDEVEKIETNKPISSYWRIPPPYVKQKTNKSVSNRKTHADTATTPDSGGMKSDRKKHYSSQQPEHDSEQNRRRRSSHVRGKSLPSEPNTAVESSKGHVRTISLESGMRGGAWRVHPNLPDYDDLRARLLALRHR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02679 359 MobiDBLite consensus disorder prediction 210 225 - -
Viun10g02679 359 Gene3D - 1 161 IPR042277 -
Viun10g02679 359 MobiDBLite consensus disorder prediction 178 327 - -
Viun10g02679 359 Pfam Regulator of Vps4 activity in the MVB pathway 5 151 IPR005061 GO:0015031
Viun10g02679 359 MobiDBLite consensus disorder prediction 178 209 - -
Viun10g02679 359 MobiDBLite consensus disorder prediction 251 273 - -
Viun10g02679 359 MobiDBLite consensus disorder prediction 274 298 - -
Viun10g02679 359 MobiDBLite consensus disorder prediction 306 325 - -
Viun10g02679 359 PANTHER IST1 FAMILY MEMBER 4 357 IPR005061 GO:0015031
Viun10g02679 359 FunFam Vacuolar protein sorting-associated protein IST1 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02679 Viun-Chr10 40111948 40114377 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02679 - - gmx:102665874 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02679 10 40111948 40114377 Viun10g02679 10 40111948 40114377 ECH