Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02669 ATGCCGCCGAAGCCGAACCAGGTGGTAGTGAGAGACCTCGTCGAGGAAGCCAAAAAACGGATCGTCATCCTCGTCGTATGCGTCGTAGGAATCTCCTATCTCATGTCATTGACAAGCTCGTCAGTTTGGGTTAACTTGCCAGCTGCAGCCTCCTTGATTATTATTCTCCGCTATTTGTCGTTAGATTTCGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTCCATCAATGTTCAGTCTTCAAAGAAGTCTATGGAAAATCCTAAAGTTGTTGCAAAGTTTGAATGGAGAACAAAAGTCAATTCTCCTGTCGTCGAGGATGCAATTGATCACTTCACCAGACATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGTTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGCAAATAGTTAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAACATAAATTTGATAGATTTTTTAATAAGGGATCTTGTTAATATTATTTGCACACACTTGGAGCTGTTTCGTGCTGCCCATTCAAAGATTGGAAAACATCATACTGGTCCATTAACAATCGAAAGTCGAGACATGGAACTAAAAATTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCATTATTTTCTGCAGAAGCTGAACATAAGGTTTTGCAGCATCTGATGACCGGTCTTATGCATTCTACTTTCAAGTCTGAGGATTTGCAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTGCTGTAATACGGCCTGTCCTAAACTTAGCAAATCCAAGATTTCTTAATGAGAGAATTGAATCCGTAGTGGTTAACAAGACCAAGGTTAACAAGGGAGTTACTGCAGCTCAAGAGGCATCTCACACTAAAGAAGATGAGTTACAGCTATCCTCTCATGATTTCTCCAAGACTTCAGATCCTTCTGTTACTGGTGTTGAGCTTGTGCAGCTAAAAAATGGTCAATCCAGAAATGTACATACATCTGCAGAACAAAATGCTCGTGATAATACTATTAAAGATCCATTACTTTCAGTTTCAGTTGATACTCGAACTTCCCGTACATGGAGCTCATTGTCTGCAAACCCCCAAACTAATGGTGACCAAAGTGTTCAAAGACATCGTTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCGCAGAAAGACCCAAGCTCTTGCTCCAGAACATTTTGAGAATGTGTGGACCAAAGGGAAAAATTACAAGAAAAAGATGGTGAGAACCAGTCAAATGAGCATGTCACACAGCATCCTGTGGTTGGGAAATTGCCAAAGGTAGACCACATGAGCAATATCTGGACCCAAGCAAATGGATACTAATTCCAAGCTTATTCCCCCAAAGGGACGCACCATTAATTCTGGACACAGTAGACAATCATCTGTGGAAAATACATCCATTCATGTGGACAAGAATGGATCAAGTTCAGTTACCTCATATAAAGACAATGAATCAGTTACGTCATACAAAGACGATGAGAACATCCACATTTATGGACATCTAAGTGATTCAGAGAGCAGTACATCTTATACTTCTGAAGATGATGAAAGTAGTACTGTCACTGGTCTTGATTCCCCTGTCACTAAGGTTTGGGATGGAAGAAGTAATAGAAAGCAGGCAGTTTCTCATGTTCATCACCCACTTGAAAATTTTGACAATCACAGGGCAAAGAAAAGGAATAAGAGCCATTCTCGCTATTCAGGACTATCCAGAGCCCAATCTGGGAATAAAAGGTCTTGGTCAGGTGTTCACAAAATGCAAACGTGGCAGGAAGTTGAGAGGACAAGCTTTTTATCTGGTGATGGTCAGGACATACTTAATGCTTCAAAATCACATGTAGATTCTGAGGAGTCCAGTGATGATGGTGATATTGAAAGTTTGGGCAGACTTTATAGTGGAGCAGCAGCCTCTTCTTCTGCCCACTCTATTTCTAAAACAGAACCTAGTAGTTTTCCTGTTACTCCCCTGAAAAGTTCCTCGGGGGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGCTCCAAAACCTTTGCTGTGTACTCCATATCCGTTACAGATATTAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTCGAGGAGCTACATAGACGCCTGAAAGAGTTCTCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCAACTGGTTTAGATGTACCAGTCATTCAAGAGCGGTGTGAATTACTGGATAAATATTTGAAGAAACTTATGCAACTACCAATAGTTTCGGAATCAATTGAAGTGTGGGACTTTCTCAGTGTCGATTCTCAGACTTACATATTCTCGAATTCTTTTTCTATCATGGAAACACTATCAGCTGGCTTGGATGCCAAGCCATTTGAGAAGACTAAAAACACTTCTCACTTTTCTGCACCTGCAAATGATCCTGTGTCTTTCCGGAGAGAAAACTGTAGTGCTGAAAGTAAAGAGTCAGTTATGAAAGGAAAAAATAATGTTGAGGCCGATGAATTGAGGTCAAAAGTAAACAGCATGCCTCTTTCGCTACCAAAAAAGAATACACATCAACGTATAAAGTCCTTTGACAATTCTGGTGGCAATACGGATATTCTAGCACAAAAGAGTGCACCTTCTCCCAATAACTTGCAAAAGACAGTGAAAGGAAGAGATAGTTCGGATGAGGTTTCTGAAGTGCACCGTGATACTTCTGATGCTTTTCCAACAGAGTGGGTGCCGCCAAATTTGAGTGTACCTATATTGGATTTGGTTGACGTTATCTTACAGGTTCAAGATGGTGGATGGATTAGGAGGAAGGCTTTTTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGACGCATTTGATGACTGGTTGATTGAGAAAATCCAGCTTCTTCGAAAGGGATCAGTGATTGCTTCAGGGGTCAAGCGAGTAGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAATAGACGACCACCACCACCACCTAGAAGCCCACCTCAAAATTCTCCTGGTGGTAATCAAACTACACAAGTATCTTCTCCTAGGTTGGAAGATGAACAGAAACGGGAGGCAGATCGGCGTGCAAAATTTGTATATGAGCTAATGATAGATCATGCACCACCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAGTATGAGCAATGTGCTGGAGATCTATATTTTTTCCTTCAGTCATCCGTTTGCTTGAAGCAGCTGGCTTATGACATCCTTGAGCTGCTTCTTACGTCGGCATTTCCAGAGCTTGATCATATTTTCAAGCAGCTGCACGACGAAAAGCATAAATTTGGTGAGTTCAGAACACAGTAA 3426 0.4116 MPPKPNQVVVRDLVEEAKKRIVILVVCVVGISYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKAGSINVQSSKKSMENPKVVAKFEWRTKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIVNGVLGEISGRMRNINLIDFLIRDLVNIICTHLELFRAAHSKIGKHHTGPLTIESRDMELKIVLAAENKLHPALFSAEAEHKVLQHLMTGLMHSTFKSEDLQCSFFRYTVRELLACAVIRPVLNLANPRFLNERIESVVVNKTKVNKGVTAAQEASHTKEDELQLSSHDFSKTSDPSVTGVELVQLKNGQSRNVHTSAEQNARDNTIKDPLLSVSVDTRTSRTWSSLSANPQTNGDQSVQRHRSGGEWGDILDVISRRKTQALAPEHFENVWTKGKNYKKKMVRTSQMSMSHSILWLGNCQRXTTXAISGPKQMDTNSKLIPPKGRTINSGHSRQSSVENTSIHVDKNGSSSVTSYKDNESVTSYKDDENIHIYGHLSDSESSTSYTSEDDESSTVTGLDSPVTKVWDGRSNRKQAVSHVHHPLENFDNHRAKKRNKSHSRYSGLSRAQSGNKRSWSGVHKMQTWQEVERTSFLSGDGQDILNASKSHVDSEESSDDGDIESLGRLYSGAAASSSAHSISKTEPSSFPVTPLKSSSGVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDINNNSWSIKRRFRHFEELHRRLKEFSEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPIVSESIEVWDFLSVDSQTYIFSNSFSIMETLSAGLDAKPFEKTKNTSHFSAPANDPVSFRRENCSAESKESVMKGKNNVEADELRSKVNSMPLSLPKKNTHQRIKSFDNSGGNTDILAQKSAPSPNNLQKTVKGRDSSDEVSEVHRDTSDAFPTEWVPPNLSVPILDLVDVILQVQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGVKRVEQILWPDGIFITKHPNRRPPPPPRSPPQNSPGGNQTTQVSSPRLEDEQKREADRRAKFVYELMIDHAPPAIVGLVGRKEYEQCAGDLYFFLQSSVCLKQLAYDILELLLTSAFPELDHIFKQLHDEKHKFGEFRTQ 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02669 1141 Pfam Sorting nexin C terminal 960 1099 IPR013937 -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 883 912 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 557 577 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 334 386 - -
Viun10g02669 1141 SMART PXA_3 109 288 IPR003114 -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 521 546 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 587 606 - -
Viun10g02669 1141 Pfam PXA domain 105 282 IPR003114 -
Viun10g02669 1141 SUPERFAMILY PX domain 688 796 IPR036871 GO:0035091
Viun10g02669 1141 MobiDBLite consensus disorder prediction 506 520 - -
Viun10g02669 1141 ProSiteProfiles PX domain profile. 687 799 IPR001683 GO:0035091
Viun10g02669 1141 ProSiteProfiles PXA domain profile. 105 284 IPR003114 -
Viun10g02669 1141 SMART PX_2 691 795 IPR001683 GO:0035091
Viun10g02669 1141 MobiDBLite consensus disorder prediction 1016 1052 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 1020 1034 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 334 390 - -
Viun10g02669 1141 PANTHER PX SERINE/THREONINE KINASE PXK 102 1136 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 621 647 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 883 924 - -
Viun10g02669 1141 Gene3D - 687 803 IPR036871 GO:0035091
Viun10g02669 1141 MobiDBLite consensus disorder prediction 451 606 - -
Viun10g02669 1141 MobiDBLite consensus disorder prediction 451 505 - -
Viun10g02669 1141 Pfam PX domain 717 795 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02669 Viun-Chr10 40059363 40067392 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02669 K17925 - gmx:100790491 1863.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02669 10 40059363 40067392 Viun10g02669 10 40059363 40067392 ECH