Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun10g02663 | ATGGTCAAAGCCATGGAACAAGAACAGGAAGGTAACAGGTCCAAACTCTTCAATTTCAAAGGAATGTTTGACAATACAGGGAGGCATGCAAAGAGTTTGAGCGTTGAGAGTGCCACCGCATTAGATCCTGCAGCTTCAGAGGAAGATCCAGTGTCGTCAAAAAGTCAGGGATCAAAAACTCAGAATGATCAAGACAAGGTTCCTAAGCCAAAGGTGAACAAGGAGGAAATTATAGCCAAAGAAAAACTACTGCAAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTCCTGTTGGGGGAGGATATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTCACAAATCTTGCAGCTGCTGTTTTTGGAGAGCAAAAGCGCCTAGAGCCAATGCCGCCAGAAAGGAAGGCAAGATGGAGAAAAGAAATCGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCTGTGCAACAAAAAAACAAGGATGGCACAGTCATGGAGGTTATGACAACACGACAGAGAACTGATCTTCACATGAATATCCCTGCCTTACGAAAGCTTGATACAATGCTCATTGACAGTCTGGATAACTTCAAAGACCAAAATGAGTTCTATTATGTATCAAGAGATGCAGATGACCCAGATAACAGAAAAAACGATAACAAGTGGTGGTTGCCTACACCTAAGGTTCCTCCAGAGGGTCTATCTGAGTCAGCAAGAAGGTTTGTTCAGTATCAGAAAGATTGTGTGAACCAAGTTCTTAAAGCAGCCATGGCCATAAATGCTCAAACTCTATCAGAAATGGAAATCCCTGAAAGCTATATTGAATCCCTGCCCAAGAATGGAAGATCAAGTCTTGGAGACATGATATACAGGAGCATCACAGAAGAATTTTTCGACCCTGATCAGCTCCTAGCATCTATGGACATGTCATCAGAACACAAAATTCTAGATCTCAAGGACAGAATTGAAGCATCCATTGTGATTTGGAGGCGGAAGATGAACCAAAAAGATTGTAAATCATCTTGGGGTTCTGCAGTAAGCATTGAGAAGAGAGAACTCTTTGAAGAGAGAGCAGAAACCATTTTACTTCTCCTAAAGCATCGTTTCCCAGGAATTCCTCAATCTGCATTGGATATAAGCAAAATCCAATATAACGGGGATGTGGGGCAAGCTGTTCTTGAAAGTTATTCAAGAATATTGGAGAGTTTAGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCACGCAGATTACCTCACTCAAAATCCACCAAATTCAAGTAGAAGAAGTGTTTCGAGAAACACAACTTCGAAATCAGATAAGTCTCCAACTCCAAAAGAAGAGGTGGTGGAAAAGGGTAGCACAGAAACAATGACACTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGAATCAGACCTTAAGAGAGACCCCTCAGATGATTTCTACAATGACATGGATAATGGAAAGCCCCAGAAGCTTCCAGAAATAGTGACCGACAAGAAAGTCTCCTACCTTGAGACATTGGGAGGCATGAGAAGTCCAACAGCACGCCATTAA | 1596 | 0.4204 | MVKAMEQEQEGNRSKLFNFKGMFDNTGRHAKSLSVESATALDPAASEEDPVSSKSQGSKTQNDQDKVPKPKVNKEEIIAKEKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGTVMEVMTTRQRTDLHMNIPALRKLDTMLIDSLDNFKDQNEFYYVSRDADDPDNRKNDNKWWLPTPKVPPEGLSESARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRSSLGDMIYRSITEEFFDPDQLLASMDMSSEHKILDLKDRIEASIVIWRRKMNQKDCKSSWGSAVSIEKRELFEERAETILLLLKHRFPGIPQSALDISKIQYNGDVGQAVLESYSRILESLAFTVLSRIEDVLHADYLTQNPPNSSRRSVSRNTTSKSDKSPTPKEEVVEKGSTETMTLSDFMGWSSDQGESDLKRDPSDDFYNDMDNGKPQKLPEIVTDKKVSYLETLGGMRSPTARH | 531 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 430 | 507 | - | - | |
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 49 | 63 | - | - | |
| Viun10g02663 | 531 | FunFam | Rop guanine nucleotide exchange factor 14 | 79 | 308 | - | - | |
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 32 | 74 | - | - | |
| Viun10g02663 | 531 | Gene3D | PRONE domain, subdomain 2 | 278 | 394 | - | - | |
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 430 | 450 | - | - | |
| Viun10g02663 | 531 | Gene3D | PRONE domain, subdomain 1 | 91 | 429 | - | - | |
| Viun10g02663 | 531 | PANTHER | ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 | 31 | 479 | IPR038937 | GO:0005085 | |
| Viun10g02663 | 531 | FunFam | Rop guanine nucleotide exchange factor 14 | 310 | 437 | - | - | |
| Viun10g02663 | 531 | ProSiteProfiles | PRONE domain profile. | 77 | 438 | IPR005512 | GO:0005085 | |
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 465 | 479 | - | - | |
| Viun10g02663 | 531 | Pfam | PRONE (Plant-specific Rop nucleotide exchanger) | 85 | 432 | IPR005512 | GO:0005085 | |
| Viun10g02663 | 531 | MobiDBLite | consensus disorder prediction | 482 | 499 | - | - | |
| Viun10g02663 | 531 | FunFam | Rop guanine nucleotide exchange factor 9 | 278 | 394 | - | - | |
| Viun10g02663 | 531 | Coils | Coil | 73 | 100 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun10g02663 | Viun-Chr10 | 40025788 | 40028852 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun10g02663 | - | - | gmx:100777496 | 865.529 |