Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02658 ATGCGGGGAAGGCAACGGGTAGCATCCAAGGATCACATACTTGGACAGGATAAGGATGAAAATTTGGATGAGAATTTAGCTTCAGTGCGTATACAGAATGCCAAACCATGTTGGTTGCACTCTTTTCGGCATGTACTAGTGGCTTCTCTTTCTGCCTTCTTGTATGGATACCATATTGGAGTAGTGAATGAAACATTAGAGAGCATTTCTATAGATCTTGGATTTAGTGGGAATACAATAGCAGAAGGTCTTGTAGTAAGTGTATGTTTAGGAGGTGCTTTTGTTGGATCTCTGTTCAGTGGATGGATGGCAGATGGTATTGGGCGTAAAAGAAGTTTCCAGTTGTGTGCTTTACCTATGATAATTGGGGCTGGGATGAGTGCAACAGCAAAAACTCTGTGGGGCATGCTTCTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCACCTGTTGTAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTCCGAGGTGCTTATGGAGCCTTAACCCAAATTGCAACATGTCTTGGACTCATGGGCTCTTTCTTTATTGGAATTCCATCAAAGGATATAGTTGGTTGGTGGCGAATTTGTTTCTGGGTATCTGTCATCCCTGCTGCAATGCTTGCCATTTTTATGGAGATCAGTGCAGAGAGTCCTCATTGGCTTTTCAAGATAGGAAGAACCACTGAAGCTGAAGCTGAGTTTGAGAAGCTGTTGGGAGGAGTACATGTGAAACCTGCAATGGTTGAACTGTCAAAGGCTGACAGAGGTGATGCATCTGATACAGTCACAGTTTCAGATTTAATCTGTGGCCGCTATTTCAGAGTGATGTTCATTGGCTGTTCGCTTTTTGCGTTGCAGCAGCTATCCGGCATAAATGCTGTTTTTTATTTCTCTTCAACTGTCTTTGAAAGTTTTGGTGTACCATCTGATATTGCAAACACATGCGTAGGAGTCTGCAATTTAGTGGGGTCTGTTATTGCAATGATTCTGATGGATAAACTTGGAAGGAAATTGCTTCTCCTGGGTAGCTTTCTGGGCATGGCGTTAACAATGGGTTTACAAGCCATTGCTGCAAGTCCTTTTGCATCAGGATTTGGAGCAATGTATCTGTCTGTCGGTGGCATGTTACTGTTTGTGATGTCATTTGCTCTAGGCGCTGGTCCAGTTCCTTGTCTTGTCATGTCTGAAATGCTACCCGGCAATATTAGAGCAAAGGCAATGGCCATTTGCCTGGCTATGCATTGGGCGATAAACTTTTTTGTGGGTCTATTTTTCTTGCGCTTGCTGGAGCTAATTGGGGCTCAACTCCTGTATACTATTTTTGGTTCATGTTGTTTGGTAGCGGTGGTTTTTGTGAAGAAATATATTCTGGAAACAAAAGGGAAGTCACTTCAGGAAATTGAAATTGCACTTCTTGCACAAGAGGCAGACTCAACATACTAA 1461 0.4339 MRGRQRVASKDHILGQDKDENLDENLASVRIQNAKPCWLHSFRHVLVASLSAFLYGYHIGVVNETLESISIDLGFSGNTIAEGLVVSVCLGGAFVGSLFSGWMADGIGRKRSFQLCALPMIIGAGMSATAKTLWGMLLGRLFVGTGMGLGPPVVALYVAEVSPPAVRGAYGALTQIATCLGLMGSFFIGIPSKDIVGWWRICFWVSVIPAAMLAIFMEISAESPHWLFKIGRTTEAEAEFEKLLGGVHVKPAMVELSKADRGDASDTVTVSDLICGRYFRVMFIGCSLFALQQLSGINAVFYFSSTVFESFGVPSDIANTCVGVCNLVGSVIAMILMDKLGRKLLLLGSFLGMALTMGLQAIAASPFASGFGAMYLSVGGMLLFVMSFALGAGPVPCLVMSEMLPGNIRAKAMAICLAMHWAINFFVGLFFLRLLELIGAQLLYTIFGSCCLVAVVFVKKYILETKGKSLQEIEIALLAQEADSTY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02658 486 ProSitePatterns Sugar transport proteins signature 1. 333 349 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 Gene3D MFS general substrate transporter like domains 39 478 IPR036259 -
Viun10g02658 486 NCBIfam sugar porter family MFS transporter 43 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 ProSiteProfiles Major facilitator superfamily (MFS) profile. 44 466 IPR020846 GO:0022857
Viun10g02658 486 Pfam Sugar (and other) transporter 45 475 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 FunFam facilitated trehalose transporter Tret1 39 479 - -
Viun10g02658 486 ProSitePatterns Sugar transport proteins signature 1. 100 117 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 SUPERFAMILY MFS general substrate transporter 32 474 IPR036259 -
Viun10g02658 486 CDD MFS_GLUT_like 47 464 - -
Viun10g02658 486 PANTHER SOLUTE CARRIER FAMILY 2 37 479 IPR045263 -
Viun10g02658 486 PRINTS Sugar transporter signature 292 302 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 PRINTS Sugar transporter signature 378 399 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 PRINTS Sugar transporter signature 52 62 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 PRINTS Sugar transporter signature 137 156 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun10g02658 486 PRINTS Sugar transporter signature 401 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02658 Viun-Chr10 39990417 39999177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02658 5 421 Organic Solute Cotransporters AT1G67300 63.420 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02658 - - gmx:100810660 828.55