Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02648 ATGGCAGAGGATTGGAAGCACACAGCTCTTCTTGTCATCGACATGCAGAAAGATTTTATAGAAGATTGGAGTCCTGTGGCACTAAAAGCAGGGAAAGACATTGTTCCAAATGTGGTTAAGGCCGTGGAAATTGCAAGGGAGCGTGGCATGCTCATAGTTTGGGTAGTACGAGAAAACGATCCCCTAGGAAGAGATGTTGAGCTTTTTCGTAGGCATTATTATACAGAGAGGAAAATTAAAATAGGGTGTAAAGGAAGTGAAGGTGCAGCATTGGTTGATGGGTTGGTAATCAAAGAAGAGGATTATAAACTTGTTAAAACCAGGTTCAGTGCTTTCTTTGCTACACACCTTCATTCAGTTCTTCAAGCTGCAGCAATTCATAATCTCGTAATCACCGGAATTCAAACTCCAAATTGTATCAGACAAACTGTGTTTGATGCTGTGTCATTGGACTATCCAAAAGTGAGTGTTATTGTTGATGCTACTGCAGCAGCCACACCAGATGTTCATCAAGCGAATTTGTTTGACATGGAAAATGTTGGAGTTGCAACCCCGACTTTACAAGAATGGAGTGAAGCCAAAGCTTGA 588 0.415 MAEDWKHTALLVIDMQKDFIEDWSPVALKAGKDIVPNVVKAVEIARERGMLIVWVVRENDPLGRDVELFRRHYYTERKIKIGCKGSEGAALVDGLVIKEEDYKLVKTRFSAFFATHLHSVLQAAAIHNLVITGIQTPNCIRQTVFDAVSLDYPKVSVIVDATAAATPDVHQANLFDMENVGVATPTLQEWSEAKA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02648 195 CDD cysteine_hydrolases 9 178 - -
Viun10g02648 195 SUPERFAMILY Isochorismatase-like hydrolases 4 192 IPR036380 -
Viun10g02648 195 Gene3D - 2 195 IPR036380 -
Viun10g02648 195 PANTHER OS02G0276400 PROTEIN 2 192 - -
Viun10g02648 195 Pfam Isochorismatase family 8 183 IPR000868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02648 Viun-Chr10 39954340 39958341 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02648 - - gmx:100499982 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02648 10 39954340 39958341 Viun10g02648 10 39954340 39958341 ECH