Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02645 ATGACTCTCCCTTCACACGATGCTTGGATTCACACTTCCCATACCCTTCTCCCCACATGGAAATCCCTTTCCCTCTCTCATCAGTCAGCAATCCCAATTTCGATATCAAGAGTTAACCAAGTCGATGCTGCACGATTGGATGTTGAAATGTCAGCCATGTTGAAAGAGCAGCTGGTTAAAGTGTTCTCATTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCGGAGCTTGATGCTTTCCTGGAGTTTCTTATTTGGCGGTTCTCAATTTGGGTGGATAAGCCAACCCCAGGCATTGCTCTCATGAACCTGAGGTACAGAGATGAGCGTGCAGTAGAACCAAGAGATAAAGTTAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCGCAGAAAATTTGGTATTGTGTTGCCACTGTTGGTGGTCAGTATATATGGGCTCGATTGCAGTCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCATTGGCACGACGCCTATGGATCTTGATACAACGAATAGAAGGAGTTTATAGAGCTGCTTCTTTTGGAAACCTGTTGATATTTCTTTGCACTGGGAGATATCGAAATCTTATTGAAAGAGCCTTACGAGCCAGGCTTGTATATGGGAGCCCAAATATGAATCGTGCTGTTAGCTTTGAATATATGAACAGGCAATTAGTTTGGAATGAATTCTCGGAAATGTTACTGTTGCTTCTTCCTCTTCTTAATTCATCATCCGTGAAAAATCTTCTCCGACCTTTCTCAAAAGATAAATCATCAAGTTCATCCGAGGATGGTTCAGCATGTCCCATTTGCCTGGCCACTCCAACCATTCCTTATGTTGCTCTACCTTGTCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCATTTAGGTGTTCCAGGTGCAGTGAGCCAGTTGTTGCTATGCAACGGCATAGTGGTGGCCCCACGGAATGA 990 0.4455 MTLPSHDAWIHTSHTLLPTWKSLSLSHQSAIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGVYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSSSSEDGSACPICLATPTIPYVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHSGGPTE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02645 329 CDD RING-HC_PEX2 272 317 IPR045859 -
Viun10g02645 329 PANTHER PEROXISOME BIOGENESIS FACTOR 2 3 325 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Viun10g02645 329 Pfam Pex2 / Pex12 amino terminal region 47 251 IPR006845 -
Viun10g02645 329 SUPERFAMILY RING/U-box 268 319 - -
Viun10g02645 329 ProSitePatterns Zinc finger RING-type signature. 289 298 IPR017907 -
Viun10g02645 329 Pfam Zinc finger, C3HC4 type (RING finger) 273 313 IPR018957 GO:0046872
Viun10g02645 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 327 IPR013083 -
Viun10g02645 329 SMART ring_2 273 313 IPR001841 -
Viun10g02645 329 ProSiteProfiles Zinc finger RING-type profile. 273 314 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02645 K06664 - gmx:100805856 622.468