Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02638 ATGGAATCGAGTCGAAGAGCGGTGGAGTCGTACTGGCGGTCGCGGTTGATCGATTCAGCTACGTCCGATGAAGATAAAGTCACACCCGTTTACAAATTGGAGGAAATCAGCGAACTTTTGCGTTCTTCGCACGTTAGTATTGTGAAGGAGATTTCGGAGTTTGTCTTAAAACGTTTGGAACATAAAAGCCCAATTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATGTGGTTGGGAAGTCTGGCGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCGGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGGTGATGCACTAAATAAGGCTGTGAGAGACACTGCTCACGAGGCTATCTCTGCCATCTTTTCAGAAGAGAATAGTAAGCCAGCACCTGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTATGAACCGCCACAGGAAGATAAAAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGTGCATCAATTAAGCAAGGGCTTAATACCTTAACGCAGGGACATTCGCTGATGAAAAATGATCCTGGCAGCTATAAGAGTCCAAATCTTCGTAGATCGTTGACCAATGAAACAGAACATGGTGACAGATATGAACCAATTTCGTATCATAATGAAGCTCAGAGTAGTTTTGGAGGTTCAAAGAATCAATCCTCTGGTCCTTGGAACCAAGATTCAAGAGTAACTAAGACGGAAACATCAAATGGGGAATCTGGTGCAAGTTCTGTAGAGAGTAAGACAAGAGAGCATAAGTTACTGGAGACAATTGTTACTTCAGGAGGTGTTCGCCTGCAACCCACTCGTGATGCAATTCAAGCTTTCCTAGCAGAGGCTGCAAAGTTAGATGCATTGGCTTTATGTCATGCCCTTGAACTGAAGCTTCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAGTCCATTCTGAGGAAGAAGGATGATGATCATTTTTCACTGGTGGAATCTTACTTCACTGAAAATAGAGATGTGGTGCTGAGATGTTCTGAATCTCCGCAAGTCTCTTTACGGGAAAGGGCTGCGAAGGTTCTTGGTCTTTTAGGTGAAGGCCAGTCAAACAGCTCTGCAATTAATTCAGAGAATGCTGTGAAAACAGAGAATGCTGCTGTTGTGGAGCTGCCTAACTTGATTGACACTGGTGATTCAGATGATTATCAAGGAACTGAGGACACTCTAAAGAGTGTAACAGATCAAAATATATCAACTTTGACATCCACTCCTCTGGTTGATGATTTATTTGGAGATTTCAGCAGCTCTATTGGGGCTAGTCAAGAAATAAAAAATGATGATGATCCATTTGCTGATGTTTCATTTCACACAAGTGAGAACAAAGAAAATGCTGATGATCTCTTTTCTGGGATGACTGTTGGTAGTGATAAGCAGAGCAATCATGAGAGTCATAGGCAGGGGAATATCAACGATCCTGGACTTTTTGACATTTTTACTTCCAATTCTGACCACGGAAACCATAAGGAGCTTGTTACTGATTTAGTGGGTGGTCTATCAATCGATGAAAATACCTCTAGTACAAAGCAGAATCCTTCCATGCAATCTGAATCTTTATTTTCAGGCTTAACTGACCATATTCCTGGCAATACTTCAGATGGCATGTTGAGCTCTCAGCCAATGGGGTTGAATGTAAATCCAATTTTTCCTACTGGTGCTCTGCCTTTTAATATGCAGCCTGGCTTCATGTTGAACCAAGCTTATTCTTCCCAGCCTCTTAATTACGGTGCCATGGGAACTCTTTTGGCTCAACAGCAATTCTTAGCAACAATGGCTAATTTCCAACACCTTAATAATGTCAACATGCGAGATGATGGTATTACTCAAATGGCTGGTCCCAATGGAAGATCACCCTTGCCAGACATATTTCAACCAAATTTTCAAACTCAAACTCCTAGCTCAATGATCAACACCTCAAGGAAAGAAGAAACTAAAGCATTTGACTTTATCTCTGACCATATGACCTCTGCTCGTGATTCAAGGAGAATGATTTAA 2088 0.4176 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEISEFVLKRLEHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEENSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGLNTLTQGHSLMKNDPGSYKSPNLRRSLTNETEHGDRYEPISYHNEAQSSFGGSKNQSSGPWNQDSRVTKTETSNGESGASSVESKTREHKLLETIVTSGGVRLQPTRDAIQAFLAEAAKLDALALCHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSLVESYFTENRDVVLRCSESPQVSLRERAAKVLGLLGEGQSNSSAINSENAVKTENAAVVELPNLIDTGDSDDYQGTEDTLKSVTDQNISTLTSTPLVDDLFGDFSSSIGASQEIKNDDDPFADVSFHTSENKENADDLFSGMTVGSDKQSNHESHRQGNINDPGLFDIFTSNSDHGNHKELVTDLVGGLSIDENTSSTKQNPSMQSESLFSGLTDHIPGNTSDGMLSSQPMGLNVNPIFPTGALPFNMQPGFMLNQAYSSQPLNYGAMGTLLAQQQFLATMANFQHLNNVNMRDDGITQMAGPNGRSPLPDIFQPNFQTQTPSSMINTSRKEETKAFDFISDHMTSARDSRRMI 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02638 695 Pfam ENTH domain 16 129 IPR013809 -
Viun10g02638 695 PANTHER UNCHARACTERIZED 5 685 IPR039273 -
Viun10g02638 695 Gene3D - 2 139 IPR008942 -
Viun10g02638 695 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Viun10g02638 695 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Viun10g02638 695 MobiDBLite consensus disorder prediction 225 267 - -
Viun10g02638 695 SUPERFAMILY ARM repeat 37 426 IPR016024 -
Viun10g02638 695 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Viun10g02638 695 MobiDBLite consensus disorder prediction 225 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02638 Viun-Chr10 39877664 39882522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02638 - - gmx:100790466 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02638 10 39877664 39882522 Viun10g02638 10 39877664 39882522 ECH