Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02615 ATGGCCTCATACAGGCCCTTCCCTCCGCAATCGAGTCAAATTCAAAACCCTATTCCCAGTGGGAATCATCAGTATACTAATAATAATCAAAATTGGGGTGCTTACGGAGATCCCTCTAATGCTTCATTTCCCCAAATCCCTCCAAATTCCAATTATCACCATCAGCAGCAACAACATCAAAATCAACATCATGCTCCGTATGCACCTCCAAATCCCCATCACCCTCACTATCCATATCCGCCACCACCTCCACCGCCACCGGAGGCTTCATACCAGCCTCCGCCGCCACCACCTCCTCCCGCCTACTATCCCTCTAATAACCAGTATAACAACCAGCCACCTCCGCCGCCGCCGCCGTTGTCGCCGCCGCCGCCACCTCCTCCTGTTTCGCCCCCTCCTCCTCCCCCGGCAACTCAGAACAATGAAGAGCGGCGCTTCAAGGATCCTTCCACGTCCGGCCGCCGCGAATATGATCCTTCCAATCACGGCATTGCTCACAAGCAGCACAAGCACCAGCCTCCCGTGCCAGCAAAAAAGGTGAATGGGCCTCCTGGCAGAACTGAGACGGAGGAAGAAAAGAGGTTGAGGAAGAAGAGGGAGTTTGAGAAGCAGAGGCAGGAGGAAAAGCATAGGCAGCAGCTCAAGGAGTCCCAGAACAGTGTTCTGCAGAAGACTCACCTGTTGTCGTCTGGGAAGGGGCATGGCATGATTGCAGGGTCTCGATTGGGAGAAAGGAGATCCACTCCTTTGTTGAGTGCCGAGAGGGTGGAAAATAGGTTGAAGAAGCCCACGACATTTTTGTGTAAGCTCAAATTTCGAAATGAACTTCCAGATCCAAGTGCTCAGCCCAAGCTTATGGCTTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCCCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGGCAGACAACCTCTTGCTCCAGAAGATGAGGAACTGTTGCGGGATGATGAAGCTGCTACACCTATTAAAAAAGATGGCATAAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTAGCGTGGCTTGTCAAAACACAATATATATCTCCTCTAAGCATGGAGTCCACAAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAAGGGGCGTGGCATTTTGGACAATCTAAACAGTAGGGAAAGACAAATCAGGGAAATTGAAGCATCGTTTGAAGCAGCTAAGTCTGATCCTGTCCATGCAACGAACAAAGATTTGTATCCTCTTGAGGTTATGCCATTACTGCCCGATTTTGATAGGTATGATGATCAGTTCGTTGTTGCTGCATTTGATAATGCTCCCACGGCCGATTCAGAAATGTATGCTAAGTTGGACAAATCTGTTCGTGACGCCTTTGAATCAAAGGCAGTTATGAAGAGTTATGTTGCAACGAGTTCAGATCCTGCTAATCCTGAAAAGTTTTTGGCATATATGGCCCCAGCACCAGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCGTACTCTTGGATTCGCGAGTATCATTGGGATGTTCGGGGTGACGATGCAGACGATCCTACAACATTCTTGGTTGCATTTGATGACTCAGAAGCACGTTACTTGCCTCTTCCGACTAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAGGTGAAGAAGTTGAGCAATGTCCAGTACCTTCAAGAGTGACCGTAAGACGGAGGTCTAGTGTCGCTGCGATTGAGCGGAAGGATACTGGGGTTTATACAAGTTCAAGGGGCAATTCCTCGAAGAGAGCTCGTCTAGACATGGACGATGGTCTAGAACACCAACATAGAGGTGCTTCACACCAGGACAACTATCAGTCTAGTGGAGCAGAAGATTACTTGTCTGAGTGA 1980 0.4747 MASYRPFPPQSSQIQNPIPSGNHQYTNNNQNWGAYGDPSNASFPQIPPNSNYHHQQQQHQNQHHAPYAPPNPHHPHYPYPPPPPPPPEASYQPPPPPPPPAYYPSNNQYNNQPPPPPPPLSPPPPPPPVSPPPPPPATQNNEERRFKDPSTSGRREYDPSNHGIAHKQHKHQPPVPAKKVNGPPGRTETEEEKRLRKKREFEKQRQEEKHRQQLKESQNSVLQKTHLLSSGKGHGMIAGSRLGERRSTPLLSAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSGRQPLAPEDEELLRDDEAATPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGRGILDNLNSRERQIREIEASFEAAKSDPVHATNKDLYPLEVMPLLPDFDRYDDQFVVAAFDNAPTADSEMYAKLDKSVRDAFESKAVMKSYVATSSDPANPEKFLAYMAPAPGELSKDIYDENEDVSYSWIREYHWDVRGDDADDPTTFLVAFDDSEARYLPLPTKLVLRKKRAKEGRSGEEVEQCPVPSRVTVRRRSSVAAIERKDTGVYTSSRGNSSKRARLDMDDGLEHQHRGASHQDNYQSSGAEDYLSE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02615 659 PRINTS Proline rich extensin signature 115 140 - -
Viun10g02615 659 PRINTS Proline rich extensin signature 96 113 - -
Viun10g02615 659 PRINTS Proline rich extensin signature 78 94 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 1 256 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 68 139 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 644 659 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 625 643 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 1 65 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 141 165 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 184 215 - -
Viun10g02615 659 SUPERFAMILY Formin homology 2 domain (FH2 domain) 123 135 - -
Viun10g02615 659 MobiDBLite consensus disorder prediction 601 659 - -
Viun10g02615 659 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 236 655 IPR007133 GO:0006368|GO:0016570|GO:0016593
Viun10g02615 659 Coils Coil 412 432 - -
Viun10g02615 659 Pfam Paf1 266 604 IPR007133 GO:0006368|GO:0016570|GO:0016593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02615 K15174 - gmx:100800148 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02615 10 39736463 39740653 Viun10g02615 10 39736463 39740653 ECH