Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02600 ATGAAGTTGGTGGTGTTCTTGGTTGCTACAATTCTGGTGGCATCTCAATGCCATGGCGCTTCCTTCAGAAGCTTCCCTCTCCGATTGCCAACCGGTTATGGCGATGGTGCGAGTTACGGCGACGTAAGATGCGCCAGTTGGAGACTTGCCGTGGAAGCAAAAAACATCTTCGGCTTTGAAACCATTCCCGAACAGTGTGTAGAGGCTACAGCCAACTACATCGAAGGAGGACAATACCAATCAGACTCCAAAACCGTTAACCAACAAGTTTTCTTTTTCGCTAGAGACCGAGAAATCCATGAGAACGATGTGGTTCTGTTCAACATAGATGGAACCGTACTCTCCAATGTCCCATACTATTCTCAGCATGGATATGGATCGGAGAAATTCAATTCCACACGTTACGACGAGGAGTTTGTTAACAAGGGTAATGCACCAGCATTGCCTGAGACTCTTAAGAATTACAACAAACTTCTGGATCTTGGGTTGAAGGTTATCTTCTTGACCGGGAGAAGAACAGACAAAAAGGCTGTAACTGAAGCCAACTTGAAGAAAGCTGGTTACCACACATGGGAGAAGTTGATTCTCAAGGATCCATCAAACAATCAAAACTCAGTTGAATACAAATCAACTGAGAGAGCGAAGCTGGTGCAGCAGGGTTACAGAATCATTGCAAACGTCGGAGACCAGTGGAGCGGTTTGAGCGGACACAACGTAGGCATCAGAACCTTTAAGCTGCCTAATCCCATGTACTATATTGAGTAG 765 0.4562 MKLVVFLVATILVASQCHGASFRSFPLRLPTGYGDGASYGDVRCASWRLAVEAKNIFGFETIPEQCVEATANYIEGGQYQSDSKTVNQQVFFFARDREIHENDVVLFNIDGTVLSNVPYYSQHGYGSEKFNSTRYDEEFVNKGNAPALPETLKNYNKLLDLGLKVIFLTGRRTDKKAVTEANLKKAGYHTWEKLILKDPSNNQNSVEYKSTERAKLVQQGYRIIANVGDQWSGLSGHNVGIRTFKLPNPMYYIE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02600 254 NCBIfam vegetative storage protein 2 250 IPR011267 GO:0045735
Viun10g02600 254 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 4 253 - -
Viun10g02600 254 Gene3D - 41 254 IPR023214 -
Viun10g02600 254 SUPERFAMILY HAD-like 101 251 IPR036412 -
Viun10g02600 254 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 33 253 IPR005519 -
Viun10g02600 254 CDD HAD_VSP 70 253 - -
Viun10g02600 254 PIRSF VSP 1 254 IPR014403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02600 Viun-Chr10 39658342 39659799 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02600 - - vra:106773916 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02600 10 39658342 39659799 Viun10g02600 10 39658342 39659799 ECH