Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02564 ATGTTGTTGCCTATGAGTGGAGTAATAGGGATGAATTCTTCAATGGATGATATGACTTTGATTCAGCAAAGCCAGCGACATCACTTGGTTGTGAGAGAGCTTGGTGAGGAGATTGATTTGGAGATTGGACCTGGGGAGGATGACCCTTCATTTGGTAATGGTGCTCTAATTGGTGCACCAATGCGGGAATCTTCTGCTGAAGAACATGGTGAGAGCAAGCAGATGGGGATGGTTTCTCAAATTCGTAATGATTCTCAAGATATGTCCAAGAACCAACAGGTGAAAAGGAAGAAGAAGGTTGTCAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTATGTTGATGTGAAGGAAGGGACACCTAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGCCGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGCAGCCGAAACATGCAGATGAGTGCCCTGGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTACGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTTGACAAGCCTATTTATGTAAAAGTTGCCATGTCAAAAACGGCTGGATCAATTCTTGAAGCTACTCTGAAAAGGGACCCTCATGAGGTTGAATTCATTCAGGCAGTCCAGGAGGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAACTCTCGTTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAAAGAGTGATTGTTTTTAGGGTTTCTTGGGTGGATGATAGGGGCGTGACTCATGTAAATCGGGGCTTTAGGGTACAATATAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCACCCATCAATGAATTTAAGTGTTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCATACAAATTGGGAGGAGCAGCTGGTGGGAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACTTGGGACCTGACAAGGACCTTCCATCCGAGGAAATGGGTGTTGGCACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGAATATTTTGGTCTGGTTCCAGTCTTCGACCTGAAGCTACTGGCTACGGTCTGGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTTAAAGGACTAAGATGTGTTGTGAGTGGTTCTGGAAAGATCGCAATGCATGTTTTAGAAAAGCTAATTGCTTATGGTGCTCTTCCTATTTCAGTATCAGATTCCAGAGGGTATTTGTTTGATGAAGATGGATTTGACTACATGAAAATATCATTTTTGAGAGACATCAAAGCTCAGCAAAGAAGCTTGCGGGACTATTCAAAAACCTATGCTCGGTCCAAATATTACGATGAAGCAAAGCCATGGAATGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACAGAATGAAATTAATCAATCTGATGCCATTAATTTGGTCAATTCAGGTTGTCGTGTACTAGTTGAAGGTTCAAACATGCCGTGTACTCCTGAGGCAGTTCATATTTTGAAGAAGGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCGGAGGACTTTGAATCTAAATTGCAGGATGCAATGAAGCAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGTTATCAAAAGGAAAGTCCCGAGGCTCTGGTGCATGGAGCAGTCATATCTGCCTTTCTAACCATTGCTCAAGCCATGACTGATCAAGGCTCTGTATAG 1917 0.4298 MLLPMSGVIGMNSSMDDMTLIQQSQRHHLVVRELGEEIDLEIGPGEDDPSFGNGALIGAPMRESSAEEHGESKQMGMVSQIRNDSQDMSKNQQVKRKKKVVKRWREEWADTYKWAYVDVKEGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPIYVKVAMSKTAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERVIVFRVSWVDDRGVTHVNRGFRVQYNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLFDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFACASQNEINQSDAINLVNSGCRVLVEGSNMPCTPEAVHILKKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQDAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02564 638 Gene3D Glutamate Dehydrogenase, chain A, domain 3 567 638 - -
Viun10g02564 638 FunFam Glutamate dehydrogenase 395 560 - -
Viun10g02564 638 FunFam NADP-specific glutamate dehydrogenase 197 240 - -
Viun10g02564 638 Gene3D - 395 560 - -
Viun10g02564 638 FunFam NADP-specific glutamate dehydrogenase 568 638 - -
Viun10g02564 638 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 243 370 IPR006097 GO:0006520|GO:0016491
Viun10g02564 638 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 197 382 IPR046346 -
Viun10g02564 638 SMART ELFV_dehydrog_3 390 636 IPR006096 GO:0006520|GO:0016491
Viun10g02564 638 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 389 636 IPR006096 GO:0006520|GO:0016491
Viun10g02564 638 Gene3D Leucine Dehydrogenase, chain A, domain 1 241 376 - -
Viun10g02564 638 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 143 638 - -
Viun10g02564 638 Gene3D Glutamate Dehydrogenase, chain A, domain 3 197 240 - -
Viun10g02564 638 FunFam Glutamate dehydrogenase 241 376 - -
Viun10g02564 638 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 389 636 IPR036291 -
Viun10g02564 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 300 314 IPR006095 GO:0006520|GO:0016491
Viun10g02564 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 379 401 IPR006095 GO:0006520|GO:0016491
Viun10g02564 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 421 441 IPR006095 GO:0006520|GO:0016491
Viun10g02564 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 558 569 IPR006095 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02564 Viun-Chr10 39462308 39474397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02564 219 516 EF-hand Containing Proteins AT5G07440 30.464 3.03e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02564 K00262 - gmx:100788009 1196.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02564 10 39462308 39474397 Viun10g02564 10 39462308 39474397 ECH